Sphingomonas sp. LM7: BXU08_16420
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Entry
BXU08_16420 CDS
T04824
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
splm
Sphingomonas sp. LM7
Pathway
splm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
splm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BXU08_16420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
splm03400
]
BXU08_16420
Enzymes [BR:
splm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
BXU08_16420
DNA repair and recombination proteins [BR:
splm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BXU08_16420
Prokaryotic type
BXU08_16420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AQR75031
UniProt:
A0A1S6FN09
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All DBs
Position
3479032..3479754
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AA seq
240 aa
AA seq
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MARLSDTKAMGEVKLHPSWREPLKGEFADPYMETLKAFLVAEKAAGKRIFPAGGEWFRAL
DLTPLEQVRVVILGQDPYHGEGQAHGLCFSVKPGVRTPPSLVNIYKEMEADLGIPRARHG
FLEHWAEQGVLLLNAVLTVQMSMAASHQGRGWERFTDAVIRLVNAKPEPVVFLLWGSHAQ
KKAAFVDSIDKGGRHLVLKAPHPSPLSAHSGFFGSRHFSKANEFLASHGQKPIDWALPDL
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atggcccggctttccgacacgaaggcgatgggcgaggtcaaactacatccaagctggcgc
gaaccgctgaagggcgagttcgccgacccgtatatggagacgctcaaggcgttcctcgtc
gccgagaaggctgcgggcaagcgcatcttccccgcgggtggcgagtggttccgcgcgctc
gacctgacgccgctcgaacaggtacgcgtcgtcatcctcggccaggacccctatcatggc
gaggggcaggcgcacgggctgtgcttctcggtcaagcccggcgtccggacgccgccgagc
ttggtgaatatctacaaggagatggaggccgatctcggcatcccgcgcgcgcggcacggc
tttctcgaacattgggcggaacagggcgtgctgctgctcaacgccgtgctaaccgtgcag
atgagcatggccgcgtcgcatcaggggcgcggctgggagcggttcaccgacgccgtgatc
cggctggtcaatgccaagcccgagccggtggtgtttctgctctggggtagccacgcgcag
aaaaaggcggcgttcgtcgattcgatcgacaagggcggccggcatctggtgctcaaggcg
ccgcatccctcgccgctttccgcgcattcggggttcttcggcagccggcatttctcgaag
gcgaacgaatttctggccagccacggccagaagccgatcgattgggcgctgcccgatctg
tga
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