Sphingomonas sp. LM7: BXU08_16880
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Entry
BXU08_16880 CDS
T04824
Name
(GenBank) RNA polymerase subunit sigma-24
KO
K24073
RNA polymerase sigma factor CnrH
Organism
splm
Sphingomonas sp. LM7
Brite
KEGG Orthology (KO) [BR:
splm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
splm03021
]
BXU08_16880
Transcription machinery [BR:
splm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BXU08_16880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
PhyR_sigma-like
Sigma70_ECF
HTH_28
HTH_1
HTH_Tnp_ISL3
DUF134
LPD39
HTH_23
HTH_24
GerE
Collagen_mid
Motif
Other DBs
NCBI-ProteinID:
AQR75112
LinkDB
All DBs
Position
3591398..3591967
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AA seq
189 aa
AA seq
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MSLDLSALSDGELATLSQSGRDTAFAEIMRRHRDAIYRIVAGNIGDPEEALDLVQETFVA
AHRALGRYDGLRPMRRWLATIALNKCRDWRRRRAVRRLFAFALPLDASSAQVPEDRALPD
AEAADRAEVQRVGRAIAALPAQLREPLVLRTVQDLSQSETAAILGITEKAVETRVRRARA
RLSEQLRQS
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
gtgagcctcgacctgtccgcactgagcgacggcgaactcgcgaccctgagccaaagcggg
cgggacaccgcttttgccgagatcatgcgtcggcaccgcgacgcgatctaccgtatcgtc
gcgggcaatatcggcgatcccgaagaagcgctcgatcttgtccaggagacgttcgtcgcg
gcgcatcgcgcgctcggccgctatgacgggctgcgcccgatgcggcgctggctggcgacc
atcgcgctcaacaaatgccgggactggcgacggcgccgcgcggtgcgccgcctgttcgcc
tttgcactgccgctcgacgcgagcagtgcgcaggttcccgaggaccgggcgctgccggat
gccgaagccgcggatcgcgccgaagtgcagcgcgtcgggcgcgcgatcgccgcgcttccc
gcgcagctgcgcgagccgctcgtgttgcgcacggtccaggatctgagccagtcggaaacc
gcggcgatcctcggcatcaccgagaaggcggtcgagacgcgcgtgcgacgggcccgggcg
aggctcagcgagcaattgcggcaatcctga
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