Sphingomonas sp. LM7: BXU08_17080
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Entry
BXU08_17080 CDS
T04824
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
splm
Sphingomonas sp. LM7
Brite
KEGG Orthology (KO) [BR:
splm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
splm03019
]
BXU08_17080
03009 Ribosome biogenesis [BR:
splm03009
]
BXU08_17080
03036 Chromosome and associated proteins [BR:
splm03036
]
BXU08_17080
Enzymes [BR:
splm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
BXU08_17080
Messenger RNA biogenesis [BR:
splm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BXU08_17080
Ribosome biogenesis [BR:
splm03009
]
Eukaryotic type
90S particles
RNase
BXU08_17080
Prokaryotic type
rRNA processing factors
BXU08_17080
Chromosome and associated proteins [BR:
splm03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
BXU08_17080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
AQR75143
UniProt:
A0A1S6FNS1
LinkDB
All DBs
Position
complement(3629750..3630424)
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AA seq
224 aa
AA seq
DB search
MTAAALGGWIAETFGRKPVNLAAYQRALTHGSQAAANYERLEFLGDRILGLVVAEWLFER
FEDEPEGALSRRLNALVTGPVCAEVAREVGVVPYLRLGKQAREDGAADSDNVLGDVIEAL
IGAVYLEFGLEPARAFIRKAWGSRIDLQGQAPKHPKSALQEWAAANNRRPPEYEIVDRSG
PNHSPRFKVKVSIGKLPDATGEGTSKQEAETAAAAALLEKLGSK
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
ctgaccgccgcggcgctggggggatggatcgctgagacctttggccgcaagcccgtcaac
cttgccgcctatcagcgcgcgctgacgcatggcagccaggccgcggccaattacgagcgg
ctcgaattccttggcgatcgcatcctaggcctggtcgtcgccgaatggctgttcgaacga
ttcgaggacgagcccgaaggcgcgctgtcgcggcgtctcaatgcgctggtgaccggcccg
gtctgcgccgaagtcgcgcgcgaagtgggcgtcgtgccgtatctccgcctcggcaagcag
gcccgtgaggacggcgcggccgacagcgacaatgtgctgggcgatgtgatcgaggcgctg
atcggcgccgtgtatctcgaattcgggctcgagccggcgcgcgccttcatccgcaaggcc
tggggctcgcggatcgacctgcagggccaggcgcccaagcatcccaagtccgcgctccag
gaatgggcagccgcgaacaatcgccgcccgccggaatatgagatcgtcgaccgctcgggg
ccgaatcactcgccgcgcttcaaggtgaaggtgagcatcggcaagcttcctgacgccacc
ggcgaggggacgagcaagcaggaggcagagaccgcggcggcggcggcgctgctggagaag
ctgggctcgaaatag
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