Sphingomonas sp. LM7: BXU08_17125
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Entry
BXU08_17125 CDS
T04824
Name
(GenBank) ribonuclease HII
KO
K03470
ribonuclease HII [EC:
3.1.26.4
]
Organism
splm
Sphingomonas sp. LM7
Pathway
splm03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
splm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BXU08_17125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
splm03032
]
BXU08_17125
Enzymes [BR:
splm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
BXU08_17125
DNA replication proteins [BR:
splm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
RNase H
BXU08_17125
Elongation factors (archaeal)
BXU08_17125
SSDB
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Paralog
GFIT
Motif
Pfam:
RNase_HII
Biotin_carb_N
Esterase_PHB
MGTL
Motif
Other DBs
NCBI-ProteinID:
AQR75150
LinkDB
All DBs
Position
3639398..3640039
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AA seq
213 aa
AA seq
DB search
MLKSGPDLKFERKYKRLHKGHVAGVDEAGRGPLAGPVVAAAVVLDPKCIPEGIDDSKVLT
AAKRERLCEELLKCAKVGVGIASVEEIDSLNIFWATMLAMTRAVDALGFVPAFVLVDGNR
CPDWDHQSHAVVGGDALCLSIAAASIVAKHRRDCMMAELDALHPGYGWASNKGYGARVHQ
EALRALGPTPHHRRSFAPVAQAELDFGPRIAAG
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgcttaagtctgggcctgacctcaaattcgagcggaaatacaagcggctgcacaagggc
catgtcgccggcgtggacgaagcgggcaggggcccactcgccgggccggtggtcgccgct
gcagtggtgctcgatcccaaatgcatccccgagggcatcgacgattcgaaggtgctgacc
gccgccaagcgcgagcggctgtgcgaagaattgctcaaatgcgccaaggtcggggtcggc
atcgcgagtgtcgaagagatcgatagcctcaacatcttctgggcgacgatgctggcgatg
acgcgtgcggtcgatgcacttggcttcgtgcctgccttcgtgctggtcgacggcaatcgc
tgccccgattgggatcatcagagtcacgccgtagtcggcggcgacgcgctgtgcctgtcg
atcgccgcagcctcgatcgtcgccaagcatcgccgtgactgcatgatggcggagctcgac
gcgctccaccccggctatggctgggcgagcaacaagggctatggcgccagggtccatcag
gaggcgctccgcgcgctcggcccgacgccgcatcaccgccgcagcttcgcgcccgtcgcg
caggcagagctcgatttcgggcctcgcatcgccgccggatag
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