Sphingomonas sp. LM7: BXU08_17565
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Entry
BXU08_17565 CDS
T04824
Name
(GenBank) ribonuclease
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
splm
Sphingomonas sp. LM7
Brite
KEGG Orthology (KO) [BR:
splm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
splm03019
]
BXU08_17565
03009 Ribosome biogenesis [BR:
splm03009
]
BXU08_17565
Messenger RNA biogenesis [BR:
splm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BXU08_17565
Ribosome biogenesis [BR:
splm03009
]
Prokaryotic type
rRNA processing factors
BXU08_17565
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
Motif
Other DBs
NCBI-ProteinID:
AQR75231
LinkDB
All DBs
Position
complement(3732391..3733338)
Genome browser
AA seq
315 aa
AA seq
DB search
MAEWLYEAGIGENRAALVSRGTIWKARIELEAMGARHGAVLNARLVDKSTGKVAYDGGEA
LCDPLPPGITQGATLRVRIVREAIPEPGRAKLPKAVPAGADAVPDAGPDLLARITASGVP
VRMLRAHESDLLEEAGWSEVLEEAVHGDIGFPGGMLRLSPTPAMNLFDVDGAGPLEPLAV
AAAHAVARAIERHGIAGSIGIDFPTLANRAARQAVAEAIDAALPQPFERTSVNGFGFLQI
VRRRTRASLPELLRADPVGAQARAELRRIERLPPPPPATHMVDRRIANRLAQRPDWTAEL
ARRIGGATAFVGPKE
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
ttggctgagtggctctatgaggcagggatcggcgagaaccgcgccgccctggtctcgcgc
ggcaccatctggaaagcgcgcatcgaactcgaagccatgggcgcgcgccacggcgcagtg
ctcaacgcgcggctggtcgacaagagcaccggcaaggtcgcgtatgacggcggcgaggcg
ctgtgcgatccgttgccgccgggaatcacccagggcgccacgctgcgggtcaggatcgtc
cgcgaggcgattcccgagcccggccgcgcaaagctgcccaaggcagtgcctgcgggcgcc
gacgcagtgcccgacgccggtccggacctgcttgcccggatcaccgcgagcggcgtgccg
gtgcggatgctgcgcgcgcatgaaagcgacctgctcgaagaagcgggctggtccgaagtt
ctcgaagaagcggtgcatggcgatatcggctttcccggcgggatgctgcggctgtcgccg
acgccggcaatgaacctgttcgacgtcgatggcgccggcccgctcgaaccgcttgccgtc
gcggcggcgcacgcggtggcgcgcgcaatcgagcggcacggcatcgccggatcgatcggc
atcgactttccgacgctggcgaacagggccgcgcgccaggcagtggccgaggcgatcgac
gcggcgcttccccagccattcgagcggaccagcgtaaacggcttcggcttcctccagatc
gtgcggcggcgcacgcgggcgtcgctgcccgaactgctccgcgccgatccggtgggcgca
caggcgcgcgccgagcttcgccgcatcgaacggcttcccccgccgccaccggctacccat
atggtggacaggcgaatcgccaaccggctggcacagcggcccgactggaccgccgaactg
gcgcggcgaatcggcggcgcgacggcgttcgtcggccccaaggagtag
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