Sphingomonas sp. LM7: BXU08_17840
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Entry
BXU08_17840 CDS
T04824
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
splm
Sphingomonas sp. LM7
Pathway
splm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
splm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BXU08_17840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
splm03400
]
BXU08_17840
Enzymes [BR:
splm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BXU08_17840
DNA repair and recombination proteins [BR:
splm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BXU08_17840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Zn_ribbon_PriA
Helicase_C
Zn_ribbon_6
AAA_30
zf_Rg
PIF1
Motif
Other DBs
NCBI-ProteinID:
AQR75997
LinkDB
All DBs
Position
complement(3792666..3794831)
Genome browser
AA seq
721 aa
AA seq
DB search
MSRARILVLHPALGPLDYRVPQGMTVEPGSIVVVPIGPRQFAGVVWEPERLPTEEIGDNR
LRNILAVADTPPIPEPVRRLVEWTADYYLSPPSAVLAMAVRTSAAFEAAPTITEYRATGV
VPDRLTPQRAQALGRIGERQGLVRELATIADVSEGVIRGLCKVGAIEGVTVDTDSPYPLP
DPNFAPPDLSTEQADVASILRQSVTAESFQPFLLDGVTGSGKTEVYFEAVAAALASGKQT
LVLLPEIALTEPFLTRFAQRFGCEPVAWHSGLRTSQRRRAWRAISRGEAKVVVGARSALF
LPYPQLGLIVVDEAHETSFKQEEGVHYHARDVAVMRGRFEECTVVLASATPAIETRHQVE
LGRYEELKLPGRYGLAELPDIEAIDLIKEPPDRGRWLSPRLILAIDAALERGEQSLLFLN
RRGYAPLTLCRHCGHRFQCPNCTAWMVEHRLIRRLTCHHCGHTVPTPEICPECEEADSLV
ACGPGVERIADEVSVLWPDARTAIVTSDTLWSPAKAAEFVHRMEHKEIDIVVGTQLVTKG
YHFPNLTVVGVVDADLGLDGGDLRASERTFQQIMQVSGRAGRGEKPGNVFIQTHSPDARV
MQALVSGDSAAFYAAETEARRDAGAPPYGRYAAIIVSSEDKAAAEETARMIGRTAPRRDE
MHVYGPAPAPLAMLRGRHRFRLLVHARRAFDVQDMIRDWLGALEWSGKVRVAVDVDPYSF
V
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgcgctcgcatcctcgtcctccatccggcactcggcccgctcgactatcgcgtg
ccgcagggcatgacggtcgaacccgggtcgatcgtcgtcgtgccgatcggcccgcgccag
ttcgccggcgtggtctgggagcccgaacggctgccgaccgaggagatcggcgacaatcgc
ctgcgcaacatcctcgcagtcgccgatacgccaccgattcccgagccggtacgccgcctc
gtcgaatggaccgcggactattatctaagcccgccctcggcggtgctggcgatggcggtg
cgcacttcggcggcgttcgaggcggcgccgacgatcaccgaatatcgcgcgaccggcgtc
gttcccgaccggctcaccccgcagcgcgcgcaggcgctcgggcggatcggcgagcggcag
ggactggtgcgcgaactcgcgacgatcgccgatgtctcggaaggcgtgatccgggggttg
tgcaaggtcggcgcgatcgaaggcgtgacggtcgataccgacagtccctatccgctgccc
gaccccaatttcgcgccgcccgatctcagtaccgagcaggccgatgtggcgagcatcctg
cgacagtcggtaaccgcggaaagcttccagcccttcctgctcgacggggtcactgggtcg
ggcaagaccgaagtctatttcgaggcggtcgccgcggcgctcgcgtcaggcaagcagacg
ctcgtgctgctccccgagatcgcgctcaccgaacccttccttacccgcttcgcccagcgc
ttcggctgcgagccggtggcatggcattcggggctgcgcacctcacagcgccgccgagca
tggcgggcgatctcgcgcggcgaggccaaggtcgtcgtcggcgcgcgctcggcactgttc
ctgccttatccccagctcgggctgatcgtcgtcgacgaagcgcacgagaccagcttcaag
caggaagagggcgtccattatcacgcccgtgacgtcgcggtgatgcgcgggcgcttcgag
gaatgcaccgtagtcctcgcctccgccacgccggcgatcgagacacgccaccaggtcgag
ctcggccgctacgaggagctcaagctgcccggccgttacggccttgccgagctccccgac
atcgaggcgatcgacctgatcaaggagccgcccgaccgcggccgctggctgagcccgcga
ctgatcctggcgatcgacgcggcgctggagcgcggcgaacagtcgctgctgttcctcaac
cgccgcggctatgcgccgctgacgttgtgccggcactgcggccaccgcttccaatgcccg
aattgcaccgcgtggatggtcgagcaccggctgatccgccgcctcacctgccatcattgc
gggcacaccgttccgacgcccgagatctgcccggagtgcgaggaagccgacagcctcgtc
gcctgcggccccggggtcgagcggatcgccgatgaagtgtccgtgctctggcccgacgcg
cgcacggcgatcgtcacgtccgacaccctgtggtcgcccgccaaggcggcagagttcgtc
caccggatggagcataaggagatcgacatcgtcgtcggcacccagctggtcaccaagggc
tatcattttcccaacctcactgtggtcggcgtcgtcgatgccgatctcgggctcgacggc
ggcgaccttcgcgcgtccgagcgcaccttccagcagatcatgcaggtctcggggcgcgcc
ggtcgcggcgagaagccaggcaatgtcttcatccagacccattcgcccgacgcgcgggtg
atgcaggcgctcgtctcgggcgacagcgccgccttctacgccgccgagaccgaggcgcgg
cgcgacgccggtgccccgccttacggccgctacgccgcgatcatcgtgtcgagcgaggac
aaggcggccgccgaggaaaccgcgcggatgatcggccgcaccgcgccgcgccgtgacgaa
atgcacgtctatggcccggcccccgcgccgctggcgatgctgcgcggccgccaccgattc
cgcctgctcgtccatgcccgccgcgccttcgacgtgcaggacatgatccgcgactggctg
ggcgcgctcgaatggagcggcaaggtgcgcgtcgcagtcgacgtcgatccctatagtttc
gtctag
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