Sphingomonas sp. LM7: BXU08_17985
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Entry
BXU08_17985 CDS
T04824
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
splm
Sphingomonas sp. LM7
Brite
KEGG Orthology (KO) [BR:
splm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
splm02000
]
BXU08_17985
Transporters [BR:
splm02000
]
Other transporters
Pores ion channels [TC:
1
]
BXU08_17985
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
BBP2
DUF5916
Motif
Other DBs
NCBI-ProteinID:
AQR75298
LinkDB
All DBs
Position
complement(3829094..3832033)
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AA seq
979 aa
AA seq
DB search
MALAWTPVAMAQEAPAADPSAQETPESTEGDIVVQGFRASLATALNQKREETAAIDSIVA
EDIGKFPDSNLAESMQRVPGVALSRGDGGEGRNISVRGLGAGFTRVRINGMEGTSQTGSS
DIYGAGNSGRSFDFNAFPTEIFSSLAVRKTPSADVEEGSLGATVDLKAPHPLDYDKDFVL
SATARGVYNEVSKKLDPRASAIISKQFADGTFGVLLSGAYQKRHLREAGYSAVDILSSTL
GGNQLGTGAAAQPFCTPIGYTPVSPSPVTYAGRGASATMCSTGNPRTGTIAAYNTIMALR
SNFSPAAAATPGSGAFFPRIPRYVNSEQDTERFGGTATIQWKPTENTDISIDGLYSRLNV
ERRDNYIALLSFARNINNNGQPMVSVRDVEFDQNGSLVYGLFDGVDIRSEGLVDTFVSTF
KQANFNFRHRFSDSFEISGLAGISNSLWDGKERLQTFIDAIDADGVTIDFRDGGYNPTIG
FGIDVANPANFAYAPSPDGGVTFLGGFSTQGKPSRNETKNKTFELNTKWDVTPGFTVKVG
GQFRESDYSARGATQYTGQNVTRALPAGTSLTSITRQITGVDDIFGTGAPASWVAIDPDK
WRQTFNFPNGFDFCIDASCGVGTSRIRERIKSGYLMVNFDTSETLPFTLRGDAGVRYVKT
DMRAVGFLTRALASSPTGVTATANVVDRDYEDFLPSVNVVGEITPDLLVRASMARVISRP
ELGVMIPGSPSITATTRNASTNNPFLNPIRANTLDLALEWYFKPGSLLSVAYFYKDIETY
IQNATENIPFNQLGLPDALLAGTNTIPTDIFTVRRPLNTPGGPLKGFEVNAQVQFDFLPG
FLSHFGALGSYTRVTSKIDYITGTGTIFTSDLIDLSKNSASGTLYYEDDRFSIRGTASYR
DRYTRAIIAANGSDIRANQPNTFVDASASYKLTDNFKLILEAQNITDARNTLYIDSVRQD
TLFQTRIGRTFTFGLNAQF
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atggcgctggcatggacaccggtagcaatggcgcaggaagcgcccgccgcggaccccagc
gcgcaggagacgcccgagagcaccgaaggcgacatcgtcgtccagggcttccgcgcctcg
ctcgccaccgcactcaaccagaagcgcgaagagactgccgcgatcgactcgatcgtcgcc
gaagacatcggcaagttccccgattccaatctcgccgaatcgatgcagcgcgtccccggc
gtggcattgtcgcgcggtgacggcggcgaaggccgcaacatctcggtccgcggcctcggc
gccggcttcacccgcgtgcgcataaacggcatggaaggcacgtcgcagaccggatcgtcg
gacatttacggcgccggcaactcgggccgaagcttcgacttcaatgccttccccaccgaa
atcttttcgtcgctcgcggtgcgcaagacgccttcggccgatgtcgaggaaggatcgctc
ggcgccaccgtcgacctcaaggcgccgcatccgctcgattacgacaaggacttcgtgctg
agcgccactgcccgcggcgtctacaacgaggtcagcaagaagctcgatccccgcgcctcg
gccatcatctcgaagcagttcgccgacggcacgttcggcgtgctgctctccggcgcctat
cagaagcgtcacctgcgcgaagccggctattcggcagtcgacatcctgtcctcgaccctg
ggcggcaaccagctcggcaccggcgccgctgcgcagcccttttgcaccccgatcggctac
accccggtcagcccctcgcccgtgacctatgccggccgtggtgcatccgcgacgatgtgc
agcaccggcaatccgcgcaccggcacgatcgctgcgtacaacacgatcatggcgctgcgc
agtaacttcagccccgccgcggccgccacgccgggcagcggcgcgttcttcccgcgcatc
ccgcgctatgtgaattcggagcaggataccgaacgctttggcggcaccgcgaccatccag
tggaagccgaccgagaacaccgacatctcgatcgacggcctctattcgcgcctcaacgtc
gagcgccgcgacaattacattgcgctgctgtcgttcgcccgcaacatcaacaacaatggc
cagccgatggtgtcggtgcgcgacgtcgaattcgatcagaacggctcgctggtctatggc
ctgttcgacggcgtcgacatccgctcggaaggcctggtcgataccttcgtctcgaccttc
aagcaggccaatttcaacttccgtcaccgcttctccgacagcttcgaaatctccggcctg
gccggcatctcgaattcgctatgggacggcaaggagcgcctgcagaccttcatcgacgcg
atcgatgccgatggcgtgaccatcgacttccgcgatggcggttacaatccgacgatcggc
ttcggcatcgacgtcgcgaaccccgccaacttcgcctatgcgcccagccccgatggcggc
gtgacgttcctcggcggcttcagcacgcagggcaagccgtcgcgcaacgagaccaagaac
aagaccttcgaactcaacaccaaatgggacgtgacgccgggcttcacggtcaaggttggc
ggccagttccgcgagagcgactacagcgcgcgcggcgctacgcaatataccggccagaac
gtgacccgcgcgctgccggccggcaccagcctgaccagcatcacgcgccagatcaccggc
gtcgacgacatcttcggcaccggcgccccagcgagctgggtcgcgatcgatccggacaaa
tggcgtcagacgttcaacttcccgaacggcttcgacttctgcatcgacgcctcgtgcggc
gtcggcacgtcgcggatccgcgagcggatcaagagcggctatctgatggtaaacttcgac
acctcggaaaccttgcccttcacgctgcgcggcgacgcgggcgtgcgctacgtcaagacg
gacatgcgcgccgtcggcttcctgacccgtgcgctggccagcagcccgactggcgtcacc
gccacggccaacgtcgtcgatcgggactatgaggacttcctgccgtcggtgaacgtggtc
ggtgagatcacccccgacctgctggtccgtgcgtcgatggcacgcgtcatctcccggccc
gagctgggcgtgatgatcccgggttcgccctcgatcaccgcgacgacgcgcaatgccagc
accaacaacccgttcctgaacccgatccgcgccaatacgctcgatctggcgctggaatgg
tatttcaagcccggctcgctgctttcggtcgcctatttctacaaggacatcgaaacctac
atccagaatgcgaccgagaatattccgttcaaccagctgggcctgcccgatgcgttgctg
gccggcaccaacacgattccgaccgacattttcacggtgcgccgtccgctgaacactccc
ggcggcccgctcaagggcttcgaagtcaatgcccaggtgcagttcgacttcctgccgggc
ttcctctcgcacttcggcgcactgggtagctacacgcgggtgacctcgaagatcgactac
atcaccggcaccggcacgatcttcacctcggacctgatcgacttgtcgaagaactcggca
agcggcacgctctattacgaggatgatcgtttcagcatccgtggcacggccagctatcgc
gaccgctacacccgcgcgatcatcgcggcgaacggcagcgacatccgtgcgaaccagccg
aacaccttcgtcgatgcctcggcctcgtacaagctgacggacaacttcaagctgatcctc
gaagcccagaacattaccgacgcacgtaacacgctgtatatcgacagcgtgcgtcaggac
acgctgttccagacgcgtatcggccgcaccttcaccttcggcctcaacgcacagttctga
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