Sphingomonas sp. LM7: BXU08_19035
Help
Entry
BXU08_19035 CDS
T04824
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
splm
Sphingomonas sp. LM7
Brite
KEGG Orthology (KO) [BR:
splm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
splm03032
]
BXU08_19035
03036 Chromosome and associated proteins [BR:
splm03036
]
BXU08_19035
03400 DNA repair and recombination proteins [BR:
splm03400
]
BXU08_19035
DNA replication proteins [BR:
splm03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
BXU08_19035
Chromosome and associated proteins [BR:
splm03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
BXU08_19035
DNA repair and recombination proteins [BR:
splm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
BXU08_19035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
YidB
Motif
Other DBs
NCBI-ProteinID:
AQR75472
LinkDB
All DBs
Position
complement(4038831..4039109)
Genome browser
AA seq
92 aa
AA seq
DB search
MIRSELVQMLVDDNPGLSAREVEKIVSVFFDEIVARLTEDGRVELRGFGAFSTRARDGRT
GRNPRTGETVDVAAKRVPYFKPGKEMRVRLNV
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atgatccgttcggaactcgtgcaaatgctggtcgacgacaatcccggcctttcggcacgg
gaagtcgagaagatcgtctcggtattcttcgatgaaatcgttgcccggctgaccgaggac
ggtcgagtcgagctgcgcggcttcggcgcgttctccacccgcgcacgcgatggccgcacc
ggccgcaacccgcgcaccggcgagaccgtggacgtcgcagccaagcgcgtcccctatttc
aagcccggcaaggaaatgcgcgtccgcctcaacgtctga
DBGET
integrated database retrieval system
