Streptococcus pluranimalium: C0J00_05775
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Entry
C0J00_05775 CDS
T06892
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
splr
Streptococcus pluranimalium
Pathway
splr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
splr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C0J00_05775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
splr03019
]
C0J00_05775
Messenger RNA biogenesis [BR:
splr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
C0J00_05775
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_C
RNase_J_b_CASP
RMMBL
Lactamase_B
Lactamase_B_2
Anti-Pycsar_Apyc1
BHD_3
Motif
Other DBs
NCBI-ProteinID:
AUW96651
UniProt:
A0A2L0D4Z8
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Position
complement(1129129..1130790)
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AA seq
553 aa
AA seq
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MSDIKIMALGGVRENGKNLYIAEVNDAIFVLDAGLKYPENEQLGVDVVIPNLDYLIDNKD
RVQGVFLTHGHADAIGALPYLIASMNVPVFGSELTIELAKLMVKNNTAVKKFNNFHVVDS
ETEIEFGDAVVSFFKTTHSIPESLGIVVGTKEGNIVYTGDFKFDQAARDAYHTDFARLTE
IGREGVLALLADSANATSTEQVASESEVGVEIDQVIGDAQGRVIVAAVSSNLARIQQVFD
AAANYGRRVVLTGFDVENIVRTAIRLKKLHIADERIMVKPKEMSKFEDHELVILETGRMG
EPINSLQKMAIGRHRFIQIKDGDLVYIVTTPSIAKEAVVARVENMIYKAGGSVKLITQNL
RVSGHANGRDLQLMLNLMKPKYLFPIQGEYRDLAAHANMAEETGMPAENIYIMKRGDIMH
LSDQGFLHEGAIPAGDVMIDGNAIGDVGNIVLRDRKVLSEDGIFIVAMTVNKKERKIVSR
AKINTRGFVYVKKSRDILRESADLVNTTVENYLAEDGFDWGELKGQVRDEISKFLFDQTK
RRPAILPVIMEVR
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatattaaaattatggctttgggtggggttcgtgaaaacggaaaaaacctttat
attgccgaagtcaatgatgctatctttgttttagatgctgggttaaaatacccagagaac
gaacagttaggggttgatgtggttatccctaatcttgattacttgattgataataaggat
cgtgttcaaggtgtctttttgacacatggacatgctgatgcgattggtgccttgccttat
ttaattgcctcaatgaatgtgcctgtatttggttcagaattgaccattgagttggctaaa
ttgatggttaaaaacaatacagctgtcaaaaaattcaataatttccacgttgtcgatagc
gaaactgagattgagtttggcgatgctgtcgtttcattctttaaaacgacccactctatt
ccagaaagtttagggattgttgtcggcactaaagaaggtaatattgtctatacaggtgac
tttaaatttgaccaggcagcgcgtgatgcttaccatactgactttgcccgtctaacagaa
attggtcgtgagggtgtcctggctctcttggcagattctgctaatgcgacaagtacagag
caagtggctagtgaatcagaagttggcgttgaaattgatcaagttatcggagatgcgcaa
ggacgtgttattgtggcagcagtgtcaagtaacctagcccgtatccaacaagtttttgat
gcagcagctaattatggtcgtcgggttgtactgacaggttttgatgttgaaaatatcgtt
cgaacagctattcgacttaaaaagttacatatagctgatgagcgcatcatggttaaacct
aaggaaatgtctaagtttgaagatcacgaattggtaattctagagactggtcgtatgggt
gagccgattaacagcctccaaaaaatggctataggacgacaccgttttatccaaattaaa
gacggtgacttagtttatattgtgacgacaccaagtattgccaaagaagctgttgttgcg
cgtgtggaaaatatgatttataaggctggtggttctgttaagttaatcacccaaaacttg
cgcgtttctggtcatgccaatggtcgtgatttgcagttgatgctaaatcttatgaaaccc
aaatacctctttccaatccaaggggagtatcgtgacctagcagcccatgctaatatggca
gaggagactggtatgccagcagaaaatatctatatcatgaagcgtggagatatcatgcac
ctatctgaccaagggtttttacatgaaggagctattcctgcaggtgatgtcatgattgat
ggaaatgcgattggtgatgtgggtaatattgtacttcgtgatcgtaaggtcttgtcagaa
gacggtatctttatcgttgcgatgacggttaataaaaaagagcgtaaaattgtttcacgc
gctaaaatcaatacccgtggttttgtttatgttaagaagagtcgtgatattcttcgcgaa
tcagctgacttagtgaatacaactgttgaaaattatctagcagaagatggatttgactgg
ggtgaactcaaagggcaagtgcgtgatgaaatcagcaaatttttatttgatcaaaccaag
cgtcgtccggcaatcttacctgtcatcatggaagtacgttaa
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