KEGG   Spiroplasma platyhelix: SPLAT_v1c00920
Entry
SPLAT_v1c00920    CDS       T08168                                 
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
splt  Spiroplasma platyhelix
Pathway
splt03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:splt00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    SPLAT_v1c00920 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:splt03400]
    SPLAT_v1c00920 (uvrA)
DNA repair and recombination proteins [BR:splt03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     SPLAT_v1c00920 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      SPLAT_v1c00920 (uvrA)
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N nSTAND1 RsgA_GTPase BCA_ABC_TP_C AAA_16 AAA_29 nSTAND3 ATPase AAA_21 AAA_22 Viral_helicase1 SLFN-g3_helicase DnaJ_CXXCXGXG cobW MMR_HSR1 ComA NMDAR2_C AAA_23 Zn_ribbon_8
Other DBs
NCBI-ProteinID: UJB28859
LinkDB
Position
complement(107429..110305)
AA seq 958 aa
MNEEQKYIIVKGAREHNLKNINISIPKNQLVVITGVSGSGKSSLAFNTIYAEGRRRYVES
LSAYARQFLGNSEKPDVDSIDGLSPAISIDQKTTSNNPRSTVGTVTEIYDYLRLLYARVG
TPYCKNGHGEISNQTLKEMIKQIQTLKDETRIEILAPIVTSKKGTYQDLLAQLKKENFLR
VKVDNKIYTLDEEIELNKNMRHDIDIVIDRIVFKNDDVTISRVHDALEVALEHSNELAKV
TINDTNETWLFSQKYACKVCGFSLPNLEPRLFSFNAPAGACPECKGVGVRLEVDEDLLMP
DMSLSINQGGIEYYKNIVNTTNLEWQKLQVLCHHYLIDLNLPLNKLTKEQIQFIMRGSKE
PINYSLTSANGRKYPNYDYIEGVATLIERRYIETTSDLAREYYRKFMTQRICVTCKGSRL
NEDVLSVKIHTTLKDKKQLLNISELTKLDIEESLEAIKHIQLLPHQQEIAKLVLVEINKR
LNFLINVGLNYLSLSRNAQTLSGGESQRIRLATQIGAQLTGVLYVLDEPSIGLHQRDNNK
LIATLKTMRDLGTTLLVVEHDEDTMLAADWLIDIGPKAGIHGGKVVAEGTPEEVMANPKS
ITGQYLIGTKYIELPHTRRSGNGQVLEIKNATVNNLNNLSAKFPLGKFICITGVSGSGKS
SLINEVLYNDLHKILMKKNQKPNSIIKGYENVDKIIAISQEPIGRTPRSNPATYTSVFDD
IRDLFASSPEAKIRGYTKSRFSFNVPGGRCERCNGDGVIKISMHFLPDVYVACEVCEGKR
YNSETLQVKWKGKNIFDVLEMPVETALEFFANQAKIYKKLSVLEEVGLGYIKLGQQATEL
SGGEAQRIKLAAYLQKRATGKTMYILDEPTTGLHIDDIKKLIKVLNKIVDNGDTVIVIEH
NLEVIKVADYIIDLGPEGGKYGGKIIATGTPEQVIKNENSYTGEFLKPIIARDLKRLK
NT seq 2877 nt   +upstreamnt  +downstreamnt
atgaatgaagaacaaaaatatatcattgttaaaggtgcaagagaacataatttaaaaaac
attaatatcagtattcctaaaaaccaattagtagtcataactggtgtttcaggaagtggt
aaatcttctttagcttttaatacaatttatgctgaaggaagaagaagatatgttgaatca
ttgtcagcttatgctcgacaatttttaggtaacagtgaaaaacctgatgttgattcaatt
gatggcctatcgccagcaatttcaattgatcaaaaaacaacaagtaataatccgcgatca
actgttggaacagtaacagagatttatgactacttacgtttattatacgcaagagtagga
actccttattgtaagaatggtcatggtgagattagtaatcaaactttaaaagaaatgatt
aaacaaattcaaactttaaaagacgaaacaagaattgaaatcttagctccaattgtcact
agtaaaaaaggaacttatcaagatctactagcacaattgaagaaagagaactttttacgt
gtcaaagttgacaataaaatctacactttagatgaagaaattgaattaaataaaaatatg
agacatgatattgatattgtgattgatagaattgttttcaaaaatgatgatgtcacaatc
tcaagagttcatgatgctttagaagtagctttagaacatagtaatgaactagcaaaagta
acaattaatgatactaatgaaacatgattattttctcaaaaatatgcttgtaaggtttgt
ggtttttcactacctaatttagaacctcgtttgttttcattcaatgctcctgcaggagct
tgtccagaatgtaagggtgttggtgttcgtttagaagttgatgaagatttactaatgcct
gacatgagtctatcaattaatcaaggtggaattgaatattataaaaatattgtcaacaca
acaaatttggagtgacaaaaattacaagttctatgtcatcactatctaattgatttgaat
ctacccttaaataaactaacaaaagaacaaattcaatttattatgcgtggtagcaaagaa
ccaatcaactatagtctaacatcagctaatggtagaaaatatcctaactatgattatatt
gaaggtgtagcaactttaattgaaagacgctatattgaaacaactagtgatctagcacga
gaatactatcgtaaatttatgacacaaagaatttgtgttacttgtaaaggttcaagacta
aatgaagatgttttaagtgtcaaaattcatacaactctaaaagataaaaaacaattatta
aatattagtgaactaacaaaattagatattgaagaaagtttagaagcaatcaaacatatt
caattgttacctcaccaacaagaaattgctaaattagttcttgtagaaattaacaaacgt
ttgaattttttaattaatgttggcttaaattatttaagtctatcaagaaatgcacaaact
ctttcaggaggagaatcacaaagaattcgtctagcaacacaaatcggtgctcaactaaca
ggtgtgctatatgttttagatgaaccttcaattggtcttcaccaaagagacaacaataaa
ttgattgccactttaaaaacaatgcgtgatttaggaacaacactattagtagttgaacat
gatgaagatacaatgctagcagcagattgattaattgacatcggcccaaaagcaggaatt
catggtggcaaagttgttgcagaaggtacaccagaagaagttatggcaaacccaaaatca
atcactggtcagtatttaattggaactaaatatattgaacttccccatacaagaagaagt
ggtaatggtcaagttttagaaattaaaaatgccactgtcaataatttaaataacttatca
gcaaaattcccattaggaaaatttatttgtatcaccggtgtttctggtagtggaaaatca
agtttaattaatgaagttctatataatgatttgcataaaattttaatgaaaaaaaatcaa
aaaccaaatagcataattaaaggctatgaaaatgttgataaaatcatcgctatctcacaa
gaaccaattggcagaacaccaagaagtaacccagcaacttacacttctgtttttgatgac
attagagatttatttgctagtagccctgaagctaaaattcgtggctacacaaaaagccgt
ttctctttcaatgttccaggtggaagatgtgagcgatgtaatggtgatggtgtaattaaa
atttcaatgcatttcctacctgatgtttatgttgcttgtgaagtttgcgaaggcaaacgt
tacaatagtgaaacactacaagtaaaatgaaaaggaaaaaatatttttgatgttttagaa
atgcctgtcgaaacagcattagaattctttgccaaccaagcaaaaatttataaaaaacta
tcagtcttagaagaagtcggattaggatacatcaaacttggtcaacaagctactgaacta
tctggtggtgaagcacaaagaattaaactagctgcctacttacaaaaacgagcaacaggt
aaaacaatgtatatccttgatgaaccaacaacaggtcttcatatcgacgatattaaaaaa
ttaatcaaagtcttaaataaaattgtcgataatggtgatacagttattgttatcgagcat
aatttagaagttattaaagtagcagactatattatcgatttaggtcctgaaggtggaaaa
tatggtggaaaaattatcgccactggtacacctgaacaagtaattaaaaatgaaaattct
tacacaggagaatttttaaaaccaatcattgctcgtgatctaaagagacttaaataa

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