Spiroplasma platyhelix: SPLAT_v1c04320
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Entry
SPLAT_v1c04320 CDS
T08168
Symbol
hupB
Name
(GenBank) DNA-binding protein HU-beta
KO
K03530
DNA-binding protein HU-beta
Organism
splt
Spiroplasma platyhelix
Brite
KEGG Orthology (KO) [BR:
splt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
splt03032
]
SPLAT_v1c04320 (hupB)
03036 Chromosome and associated proteins [BR:
splt03036
]
SPLAT_v1c04320 (hupB)
03400 DNA repair and recombination proteins [BR:
splt03400
]
SPLAT_v1c04320 (hupB)
DNA replication proteins [BR:
splt03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
SPLAT_v1c04320 (hupB)
Chromosome and associated proteins [BR:
splt03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
SPLAT_v1c04320 (hupB)
DNA repair and recombination proteins [BR:
splt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
SPLAT_v1c04320 (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
Mnd1
DUF5066
Motif
Other DBs
NCBI-ProteinID:
UJB29196
LinkDB
All DBs
Position
complement(465640..465909)
Genome browser
AA seq
89 aa
AA seq
DB search
MTKKELVSLVSKDTNISAKQTAEVLDSFFDVFMKNVSKERIHLPIGTFTVSNRKARTGRN
PQNGKPINIPASKALKFKVSKNVKEELNK
NT seq
270 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagaaagaattagttagtttagtgtcaaaagatactaatatttcggctaaacaa
actgctgaagttcttgatagcttctttgatgtatttatgaagaatgtttctaaagaaaga
attcacttgccaattggtacttttacagtttctaaccgtaaggcaagaactggacgtaat
ccacaaaatggaaaaccaattaacattcctgcttcaaaagccttaaaatttaaggttagc
aaaaatgttaaagaagagttaaataaataa
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