Spiroplasma platyhelix: SPLAT_v1c04560
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Entry
SPLAT_v1c04560 CDS
T08168
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
splt
Spiroplasma platyhelix
Pathway
splt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
splt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SPLAT_v1c04560 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
splt03019
]
SPLAT_v1c04560 (pnp)
03016 Transfer RNA biogenesis [BR:
splt03016
]
SPLAT_v1c04560 (pnp)
Enzymes [BR:
splt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
SPLAT_v1c04560 (pnp)
Messenger RNA biogenesis [BR:
splt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
SPLAT_v1c04560 (pnp)
Transfer RNA biogenesis [BR:
splt03016
]
Prokaryotic type
tRNA degradation factors
SPLAT_v1c04560 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
SPATA25
Motif
Other DBs
NCBI-ProteinID:
UJB29220
LinkDB
All DBs
Position
complement(499720..501831)
Genome browser
AA seq
703 aa
AA seq
DB search
MTEKNFKFSFAEQDLVIELGQMANLSAQAVTLRYGDTVVLTTVNYNDNSINQDFFPLTVV
FQEKLYSIGRIPGGFLKREGFPGEYATLCARLIDRSIRPLFPEGFNYEVQVVNNVLALSE
DCDVRFVSAFATSLALALSGLPFQGPTATVVVGRINNQWIINPSKQQLIDSELELIVGGT
VDAINMIEASAAEIAEADLLEAIELAHTKIKSLIGFQTEVIKAINNPKVELPLLLIPDEI
ASFLKNYQPQVDELSKITDKKGRSNKFKTIFELAKTAFFSANPTWITDGAKEAETLKFIH
NGLEDLLKVTMREMILSTNHRIDGRKINQIRPLSSKIDILPIVHGSAIFNRGETQVLSIV
TLGALAEHQIIDDLGKDDSKRFMHHYNFPPFSVGETGRMGKPSRREVGHGALGEKALLQM
IPNEQDFPYTIRIVSEVLSSNGSTSQAAICASSLALMAAGVPTKAPIAGIAMGLIKAKDQ
YVVLTDIQGLEDHLGDMDFKVAGTTKGICALQMDIKISGLDFKILSEALQQAQVGRLAIL
DSMNQVIDKPRTQLAANAPKILQKQVPVDKIREIIGTGGKVINKIISQANNVKIDIEEDG
RILIYHQDQAAVEAAWKLIDEIINVKPIQVGDEFAGSVIKILNFGAFINLKNNTDGLIHI
SQFSKFFEKKIENLNDVVKVSDNFNVKVAKINDKGKIDLEIIK
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaaaaaattttaaattctcttttgctgagcaagatttagtaattgagttagga
cagatggctaatttatctgcacaagcagttactttgcgatatggtgacactgttgtgttg
acaactgtgaattataatgataatagtatcaatcaagactttttcccattaacagtagtt
tttcaagaaaaactatattcaattggcagaattcctgggggatttttaaagcgtgaaggg
tttccaggtgagtatgcaactttatgtgccagattaattgatcgttcaattagaccattg
tttccagaaggttttaattatgaagtacaagtagtgaacaatgttttagctttaagtgaa
gattgtgatgttcgttttgtttcagcttttgcaacaagtttggcattagcattaagtggg
ttaccatttcaaggaccaacagcaactgttgttgttggtagaattaataatcaatgaatt
atcaatccttctaaacaacaattaattgattcagaattagaattaattgttggaggaaca
gttgatgcaattaatatgattgaagcatcagcagcagagattgctgaagcagacttgcta
gaagcaattgaattagcacacacaaagattaaaagtttaattggttttcaaacagaagtt
atcaaagcaattaataatccaaaagttgaattaccattacttttaattcctgatgaaatt
gctagttttttaaagaactatcaaccgcaagttgatgaacttagtaaaattactgataaa
aaaggccgaagcaataaatttaaaacaatttttgaattagcaaaaacagcatttttcagt
gctaatccaacttgaataactgatggagctaaagaagcagaaacacttaagtttattcat
aatggtctagaagacttattaaaagttacaatgagagagatgattctttcaactaatcac
cgtattgatggtcgtaagattaatcaaattagaccactatcaagtaagatagatatcttg
ccaattgtccatggtagtgcgatttttaatcgtggtgaaactcaagtactatcaattgtt
actttaggtgcactagcagagcatcagatcattgatgacttaggaaaagatgactctaag
cgttttatgcatcattacaattttccaccattttcagtgggtgaaacaggaagaatgggt
aaaccatcaagaagagaagtgggacatggagcattaggagaaaaagctttattacaaatg
attcctaatgaacaagatttcccatacacaattcgtattgtttcagaagttctatcatct
aatggttcaacttctcaagcagcaatttgtgcgtcaagtttagctttaatggcagcaggt
gtaccaactaaagcaccaatagcaggaattgctatgggcttaattaaagcaaaagatcag
tatgttgtactaacagatattcaaggtttagaagatcatttaggagacatggattttaaa
gttgctggaacaactaaaggaatttgtgccttacaaatggatatcaaaatttctggactt
gattttaagattctttcagaagcattgcaacaagcacaagtgggacgtttagcaattttg
gatagtatgaatcaagtaatcgataagccaagaacacaactagcagcgaatgcgccaaag
attctccaaaagcaagtgcctgttgataagattagagaaattattggtacaggtggtaaa
gtaatcaataaaattattagtcaagcaaataatgttaagattgatattgaagaagatgga
cgaattttaatttatcatcaagatcaagcagccgttgaagcagcttgaaaattaattgat
gaaattattaatgtcaaaccaattcaagttggtgatgaatttgctggtagtgtgattaag
attttaaactttggtgcttttataaatttaaaaaataacacagatggtttaattcatatt
tcacaattttcaaagttttttgaaaagaagattgaaaacttaaatgatgttgttaaggtt
agtgataactttaatgttaaggtagcaaaaattaatgataaaggtaaaattgatttagaa
attattaaataa
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