Spiroplasma platyhelix: SPLAT_v1c04700
Help
Entry
SPLAT_v1c04700 CDS
T08168
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
splt
Spiroplasma platyhelix
Brite
KEGG Orthology (KO) [BR:
splt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
splt03016
]
SPLAT_v1c04700 (truB)
Enzymes [BR:
splt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SPLAT_v1c04700 (truB)
Transfer RNA biogenesis [BR:
splt03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SPLAT_v1c04700 (truB)
Prokaryotic type
SPLAT_v1c04700 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
UJB29234
LinkDB
All DBs
Position
complement(512424..513326)
Genome browser
AA seq
300 aa
AA seq
DB search
MLKDYILLIDKPAYMTSQDCLTILKQRLRVKKIGHTGTLDPIATGLMVVLVNEATKLSNF
ILALDKTYIATMQLFIRTDTGDISGNVVENNSAFKISEESLRRVFNAFDNIQYEQVVPLY
SAVKKEGQKLYQYAYKNQPVELPKRMVSIKRIKFLTYNNNFIQFQVTCSKGTYIRALIGD
IAASLKTVATMTSLRRIQQSEFSIQDALTLEEITDEKSVKSHMISIVEGLKHSLKVVTIT
NRDTLSKIKHGKQISLPDIEVKKEVLLVNNQKQPLAIYANEKGTTYISKRGFNLDESNKD
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
ttgttgaaggattatattttattaattgataagccagcttatatgacatcgcaagattgt
ctaacaattttgaagcaaagactaagagttaaaaaaattggtcatacaggaacattagat
ccaattgctacgggcttaatggttgttttggtgaatgaagcaactaaattaagtaatttt
attttggctttagataagacatatatcgcaacaatgcaactatttattagaactgatact
ggagatattagtggtaatgtggtagaaaataattctgcttttaagatttcagaagaaagt
ttaagaagagtttttaatgcttttgataatattcaatatgaacaagttgtgccactttat
tcagcagtgaaaaaagaaggacaaaaattgtatcagtatgcttataagaatcaaccagtt
gaattaccaaaaagaatggtgagtatcaaaagaattaaattcctaacctataataacaac
ttcattcagtttcaagttacttgttcaaaaggaacctacattcgtgctttaattggtgat
atcgctgcatctttaaaaactgtggctactatgactagtttaagaagaatccaacaatct
gaatttagtattcaagatgcgctaacattagaagaaattactgatgaaaaaagtgttaaa
tcgcatatgatttcgattgttgaaggattgaaacattcgttaaaagttgttactattact
aatagagatactcttagtaaaattaaacatggtaagcaaattagtttaccagatattgaa
gttaaaaaagaagttttattggttaacaaccaaaagcaacctttagcaatttatgctaat
gaaaagggtactacttacattagtaaaagaggatttaacttagatgaaagtaacaaagat
taa
DBGET
integrated database retrieval system
