Spiroplasma platyhelix: SPLAT_v1c04710
Help
Entry
SPLAT_v1c04710 CDS
T08168
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
splt
Spiroplasma platyhelix
Brite
KEGG Orthology (KO) [BR:
splt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
splt03032
]
SPLAT_v1c04710 (topA)
03400 DNA repair and recombination proteins [BR:
splt03400
]
SPLAT_v1c04710 (topA)
Enzymes [BR:
splt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
SPLAT_v1c04710 (topA)
DNA replication proteins [BR:
splt03032
]
Prokaryotic type
DNA Topoisomerases
SPLAT_v1c04710 (topA)
DNA repair and recombination proteins [BR:
splt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SPLAT_v1c04710 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_PADR1
Lar_restr_allev
Toprim_2
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
UJB29235
LinkDB
All DBs
Position
complement(513341..515290)
Genome browser
AA seq
649 aa
AA seq
DB search
MSSKLVIMESPTKSKTVASYLGSDYVVLSSDGHIRDLAAKGPFGLGINFDDYTPIYRTPR
AKMPKIKELKAAAKKADHIYLATDHDREGEAIAFHLDSVLETKGKSSRVTFNEITKDAIL
TAMENDHNLDMNLVHSQQARQMLDRMIGFRLSNLLQKKIGSRSAGRVQSVALKLIAMRER
EIANFVPEEFWTITSAYQDFILTLEKYQNEAIKITNEKEALAIKAALSTSYKVTSITKQS
RKRNSLNPLTTSTMLQAATQLNFTTLKTTFIAQQLYEGIEIKGKLQGFISYPRTDSIRLN
SSFIETAKELIVQTYGQEYLGAEKSQTNKKNVQDAHEAIRPTDLAITPKIASQFLNKDQM
KLYQLIYNRTLSSLMAPAKLLTTTIWFDNNNYQFKLSGQEIEFKGFLIIDDSSIEKEEVL
NLPNLKQDEVISTDKVNLQQNFTKPKPRYSEARLIKTLEDLGIGRPSTYSPILNTIKVRG
YVILENKAFKATEKGLLTNDKLQEFFYDIINENYTSQVEAELDSIAQGQLVMNQVVEDFW
LKFEPRVENAFENMKEEKIKPKLLDEICPLCHEHQLVERVGRYGKFIGCSGFPKCRYIKK
EVKIIKPCPTCKTGNLVVKSGKGNRKFLGCTNYPDCKHIEKYEDDENKK
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgagttcaaaattagtaattatggagtcaccaacaaaatctaaaacagttgctagttat
cttggtagcgattatgtggttttatcttctgatggacatatcagagatttagcagcaaaa
ggaccctttgggttggggattaattttgatgactatactccaatatatcgaacaccaaga
gctaaaatgccaaaaattaaagaattaaaagcagcagctaaaaaagcagatcacatctat
ttagcaactgaccatgaccgtgaaggagaagcaattgcttttcatttagatagtgtgcta
gaaacaaaaggtaaatcttcaagagtgacttttaatgaaatcactaaagatgctatccta
acagcaatggaaaatgatcacaacttggatatgaatttagtgcatagtcaacaagcaaga
caaatgttagatcgtatgattggatttcgtttgagtaatttgttacaaaagaaaattgga
tcaagaagtgcaggaagagtgcaatctgttgctttaaaattaattgcaatgcgagaacgt
gagattgctaattttgttcctgaagaattttgaacgattactagtgcctatcaagatttt
attctaacactagaaaagtatcagaatgaagcgattaagattaccaatgaaaaagaagca
ctagcaattaaggcagcattaagtactagttataaggtaactagcattactaagcaaagt
cgtaaaagaaattctttaaatccactaacaactagtacaatgcttcaagcagcaacgcaa
ttaaatttcactactttaaaaacaacttttattgctcagcaattatatgaaggaattgag
attaagggtaagttacaaggatttattagttatccaagaactgactcaattcgtttgaat
agcagttttattgaaacggcaaaagaattaattgttcagacttatggtcaagaatatctt
ggtgcagaaaaaagtcaaactaataaaaagaatgtccaagatgcccatgaagcaattcgt
ccaactgatttagcaatcacaccaaaaattgctagtcaatttttaaataaagatcaaatg
aaactctatcaattgatttacaatcgtactttatcttcactaatggcgccagctaaatta
ctaacaacaacaatttgatttgacaacaataactatcaatttaaattatctggtcaagaa
attgaatttaaaggatttttaattattgatgatagtagtattgaaaaagaagaagttcta
aatttacctaacttgaagcaagatgaagtgatcagcactgacaaagttaacttacagcaa
aactttactaaaccaaaaccaagatatagtgaagcaagattaattaagactttagaagat
ttagggattggaagaccttcaacatatagtccaattttgaacacaatcaaagttcgtggt
tatgtgattcttgaaaataaagcttttaaagcaactgaaaagggtttgttaactaatgac
aaacttcaagagtttttttatgatattattaacgagaactatacatcgcaagttgaagca
gaattggatagtattgcacaagggcaattagtgatgaatcaagtggttgaggatttctga
ctgaaatttgagccaagagttgaaaatgcttttgaaaatatgaaagaagaaaagatcaaa
ccaaaactattagatgaaatttgtcctttatgtcacgaacatcaattagttgaaagagtt
ggtcgttatggcaagttcattggttgttcaggctttcctaaatgtcgatacattaaaaaa
gaagttaaaattatcaaaccttgtccaacttgcaaaactggaaacttagttgttaagtca
ggtaagggcaatcgaaagtttttaggatgtactaattatcctgattgtaaacatattgaa
aaatatgaggatgatgaaaataaaaaatag
DBGET
integrated database retrieval system
