Streptomyces pluripotens: LK06_012390
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Entry
LK06_012390 CDS
T04845
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
splu
Streptomyces pluripotens
Pathway
splu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
splu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LK06_012390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
splu03021
]
LK06_012390
03400 DNA repair and recombination proteins [BR:
splu03400
]
LK06_012390
Enzymes [BR:
splu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LK06_012390
Transcription machinery [BR:
splu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LK06_012390
DNA repair and recombination proteins [BR:
splu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LK06_012390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
TarH
Motif
Other DBs
NCBI-ProteinID:
ARP70634
UniProt:
A0A221NZF0
LinkDB
All DBs
Position
complement(2798177..2802091)
Genome browser
AA seq
1304 aa
AA seq
DB search
MLDVNFFDELRIGLATADDIRQWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITYVDEERRTRDLPSLEAHVSVERQQIENRRDSDLEARAKKLETD
LAELEAEGAKADVRRKVREGAEREMKQLRDRAQREIDRLDEVWNRFKNLKVQDLEGDELL
YRELRDRFGTYFDGSMGAAALQKRLESFDLEEEAEKLREIIRTGKGQKKTRALKRLKVVS
AFLQTSNSPKGMVLDCVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSARSVIVVGPQLKLHQCGLPKAMALELFKPFVMKRLVDLNHAQNIKSAKRMVERGR
TVVYDVLEEVIAEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQIHPLVCTAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILKPADGRPVTMPTQDMVLGLFFLTTDGEMRDIKGE
GRPFASVAEAIMAFDAGELSLQSRVDIRFPVGTIPPRGWTPPAPEEGDDLVGAGEWQQGD
SFRLNTTLGRALFNELLPEDYPFVDYEVGKKQLSEIVNDLAERYPKVIVAATLDNLKAAG
FYWATRSGVTVAISDVVVPEAKKEIVRGYEAQDEKVQKQYERGLITKDERTQELIAIWTK
ATNEVAEAMNDNFPKTNPIFMMVNSGARGNMMQMRQIAGMRGLVSNAKNETIPRPIKASF
REGLSVLEYFISTHGARKGLADTALRTADSGYLTRRLVDVSQDVIIREEDCGTDRGLKLL
IADRGADGVLRKTEDVETSVYARCLAEDIVVDGQVLAPAGTDLGDVLIEELVGRGVEEVK
TRSVLTCESAVGTCAMCYGRSLATGKLVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVA
GDDITQGLPRVVELFEARTPKGVAPISEASGRVRIEETEKTKKIIVTPDDGSDETAFPIS
KRAKVLVREGDHVDVGQQLTVGATNPHDVLRILGQRAVQVHLVGEVQKVYNSQGVSIHDK
HIEIIIRQMLRRVTIIESGDAELLPGELVERSKFEHENRRVVQEGGHPASGRPQLMGITK
ASLATESWLSAASFQETTRVLTDAAINAKSDSLIGLKENVIIGKLIPAGTGLSRYRNIRV
EPTEEAKAAMYSAVGYDDIDYSPFGTGSGQAVPLEDYDYGPYNQ
NT seq
3915 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgtcaacttcttcgacgagctccggatcggcctggccaccgctgacgacatc
cgtcagtggagccacggcgaggtcaagaagcccgagaccatcaactaccgcaccctgaag
cccgagaaggacggcctcttctgcgagaagatcttcggccccacccgggactgggagtgc
tactgcggcaagtacaagcgcgtccgcttcaagggcatcatctgcgagcgctgtggcgtc
gaggtcacgcgcgccaaggtgcgtcgtgagcggatgggccacatcgaactggccgcgccc
gtcacccacatctggtacttcaagggcgtcccgtcgcgcctgggctacctgctcgacctt
gccccgaaggacctggagaaggtcatctacttcgcggcgtacatgattacgtacgtcgac
gaggagcgccgtacccgtgacctgccctcgcttgaggcgcacgtctcggtcgagcgccag
cagatcgagaaccgccgtgactccgacctggaggcccgggccaagaagctcgagaccgac
ctggccgagctggaggccgagggcgccaaggccgacgtgcgccgcaaggtgcgcgagggt
gctgagcgcgagatgaagcagctgcgcgaccgtgcgcagcgcgagatcgaccgcctcgac
gaggtgtggaaccggttcaagaacctcaaggtccaggacctggagggcgacgagctgctc
taccgcgagctgcgggaccgcttcggcacgtacttcgacggctcgatgggtgccgcggcg
ctgcagaagcgcctggagtccttcgacctagaggaggaggccgagaagctccgcgagatc
atccgcaccggcaaggggcagaagaagacccgcgccctgaagcgcctgaaggtcgtctcc
gcgttcctgcagacctccaacagccccaagggcatggtcctggactgtgtgccggtcatc
ccgccggacctgcgtccgatggtgcagctggacggtggccgcttcgcgacctccgacctg
aacgacctgtaccgccgcgtcatcaaccgcaacaaccgcctgaagcgcctcctcgacctc
ggtgcgcccgagatcatcgtgaacaacgagaagcgcatgctccaggaggccgtcgacgcg
ctcttcgacaacggccgtcgcggtcgcccggtcacgggccccggcaaccgtccgctgaag
tcgctgtccgacatgctgaagggcaagcagggccgcttccgtcagaacctgctcggtaag
cgagtcgactactcggcgcgttccgtcatcgtcgtcggcccgcagctgaagctgcaccag
tgcggtctgccgaaggcgatggcgctggagctgttcaagccgttcgtgatgaagcgcctg
gtcgacctgaaccacgcgcagaacatcaagagcgccaagcgcatggtggagcgcggtcgc
acggtcgtgtacgacgtcctcgaagaggtcatcgccgagcacccggtgctgctgaaccgt
gctcccaccctgcaccgcctcggcatccaggccttcgagccgcagctggtcgagggcaag
gccatccagatccacccgctcgtctgcaccgcgttcaacgcggacttcgacggtgaccag
atggccgtgcacctgccgctgtccgcggaggcgcaggccgaggcccgcatcctgatgctg
tcctcgaacaacatcctcaagcccgccgacggccgtccggtgacgatgccgacccaggac
atggtcctcggtctgttcttcctcaccaccgacggcgagatgcgggacatcaagggcgag
ggccgcccgttcgcttcggtcgccgaggcgatcatggcgttcgacgccggtgagctgtcg
ctgcagtcgcgcgtggacatccgcttcccggtgggtaccatcccgccgcgcggctggacc
ccgccggcccccgaggagggggacgacctcgtcggggcaggggagtggcagcagggtgac
agcttccggctgaacaccacgctgggtcgtgcgctcttcaatgagctgttgcccgaggac
tacccgttcgtcgactacgaggtcggcaagaagcagctctccgagatcgtcaacgacctc
gccgagcgctacccgaaggtcatcgtggcggcgacgctcgacaacctgaaggcggccggc
ttctactgggccacccgttccggtgtcaccgtcgccatctccgacgtcgtcgttcccgag
gcgaagaaggagatcgtccgcggctacgaggcgcaggacgagaaggtccagaagcagtac
gagcgcggtctgatcaccaaggacgagcgcacgcaggagctcatcgcgatctggaccaag
gcgaccaacgaggtcgccgaggcgatgaacgacaacttcccgaagaccaacccgatcttc
atgatggtgaactcgggtgcccgaggcaacatgatgcagatgcgtcagattgccggtatg
cgtggtctggtgtcgaacgcgaagaacgagacgattccgcgtccgattaaggcgtcgttc
cgtgagggcctgtccgtgctggagtacttcatctccacgcacggtgcccgtaagggtctg
gcggacaccgctctgcgtaccgctgactcgggttacctcacccgtcgtctggtggacgtt
tcgcaggacgtcatcattcgcgaggaggactgcggcaccgaccgcggcctcaagctgctg
atcgccgaccggggcgcggacggcgtgctgcgcaagacggaggacgtcgagacctccgtg
tacgcgcgctgcctcgccgaggacatcgtggtcgacggccaggtgctggccccggccggc
accgacctgggcgacgtcctcatcgaggagctcgtcggccgtggcgtcgaggaggtcaag
acccgctcggtcctgacctgcgagtccgccgtcggtacctgcgcgatgtgctacggccgt
tcgctggccaccggcaagctggtcgacatcggtgaggcggtcggcatcatcgccgcccag
tccatcggtgagcccggtacccagctgacgatgcgtaccttccacaccggtggtgtggcc
ggtgacgacatcacccagggtctgccgcgtgtcgtcgagctcttcgaggcccgtaccccg
aagggtgtcgccccgatctccgaggcctctggccgggtgcggatcgaggagacggagaag
acgaagaagatcatcgtcacgccggacgacggcagcgacgagacggccttcccgatctcc
aagcgcgccaaggtcctggtccgcgagggcgaccacgtcgacgtgggccagcagctcacc
gtgggtgccaccaacccgcacgacgtgctgcgcatcctgggccagcgcgccgtccaggtc
cacctggtcggcgaggtccagaaggtgtacaactcgcagggtgtgtcgatccacgacaag
cacatcgagatcatcatccggcagatgctccgccgcgtgacgatcatcgagtccggcgat
gccgaactgctgcccggcgagctggtcgagcgctcgaagttcgagcacgagaaccgtcgt
gtggtccaggagggcggtcacccggcctccggtcgtccgcagctgatgggtatcaccaag
gcctcgctggcgaccgagtcctggctgtcggcggcttccttccaggagacgacccgagtc
ctgacggatgcggcgatcaacgccaagtccgacagcctcatcggcctcaaggagaacgtc
atcatcggtaagctcatcccggccggtacgggtctgtcccgctaccgcaacatccgggtc
gagccgaccgaggaggccaaggccgcgatgtactcggccgtcggctacgacgacatcgac
tactcgccgttcggcaccggctccggccaggccgttccgctggaggactacgactacggt
ccgtacaaccagtaa
DBGET
integrated database retrieval system
