Streptomyces pluripotens: LK06_017240
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Entry
LK06_017240 CDS
T04845
Name
(GenBank) RNA polymerase subunit sigma-24
Organism
splu
Streptomyces pluripotens
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Gene cluster
GFIT
Motif
Pfam:
NPCBM
Sigma70_r2
Sigma70_r4_2
zf-HC2
PhyR_sigma2
Sigma70_ECF
DUF5114
Motif
Other DBs
NCBI-ProteinID:
ARP74235
UniProt:
A0A221P8H2
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Position
complement(3822601..3824403)
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AA seq
600 aa
AA seq
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MPAQRGGTVLPPPREASPADGELIERMRGGDDSAYEELYRRHADAVRRYARTCCRDGHTA
DDLTAEVFARMLQAVRGGSGPEHAVRAYLLTSVRRVAANWTKSARREHLVDDFAVFAQQA
ARASKVSEDDTLDVGADARALHEAERSLAMQAFRSLPERWQAVLWHTEVEDESPSEVAVL
FGLDANGTRVLASRAREGLKQAYLQAHVSATLTSDRDCARYADQLGSYARRKLRIRAERG
LRKHLEECARCRLAAAQIEEVASGIPAVVPVAVIGWFGAAGYAKVLGIVAGSTGAAAAGA
AAATAGSSGGASGAGGAAAAEGLGAPVKAGVAAGVVAVAAAVVALALMDDGRPAKEVARP
EPSVPVVQSEPPKPTQHEEKPSPRPVVLAPEPAPTQKPSPVPTPHPTPTPTPTPTPKAPP
APKSAPTPTPPSAPTPTPTATAPPTPTPTPPPQPSPTIYHVSDLRYDIGGDGTRPEIRLR
ESSWLWRRHGMSISGKQYTRGVTVHGESSVTIALNRQCTAYDALAGVDDLTLGLGKVTFS
VYADGVRLWQSGPVRGRDQAVPVHVDLTGRTTVRLAVEPHNNAFDRAALADWADSRFTCR
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgcccagcgcggggggaccgtactgccacccccgcgggaggcgtcgccggccgac
ggcgagctgatcgagcggatgcgcggcggcgatgactccgcgtacgaggagttgtaccgc
aggcacgcggatgccgtgcggcgctacgcccgcacctgctgccgggacgggcacaccgcc
gacgacctcactgccgaggtcttcgcccggatgctgcaggccgtgcgcggcgggtcgggg
cccgagcacgccgtacgtgcctatctgctgacctccgtgcggcgcgtggccgcgaactgg
accaaatccgcccgacgcgagcacctcgtcgacgacttcgccgtcttcgcccagcaggct
gcgcgggcgtcgaaggtgtccgaggacgacacgctggacgtgggcgccgatgcccgtgcc
ctgcacgaggccgagcggtccctggcgatgcaggccttccgctcactgcccgagcgctgg
caggccgtgctgtggcacaccgaggtcgaggacgagtccccgagcgaagtggccgtgctg
ttcgggctggacgccaacggcacccgggttctcgccagccgcgcacgcgaggggctgaag
caggcctacctccaggcccacgtcagcgccaccctcaccagtgaccgggactgcgcccgc
tacgccgaccagctcggcagctacgcccgccgcaagctgcgcatccgcgccgagcggggt
ctacgcaagcacttggaggagtgcgccaggtgccggctagcggcggcgcagatcgaagag
gtcgcaagtggtatccccgcggtcgtcccggtcgccgtcatcggctggttcggcgccgcc
ggatacgccaaggtcctcggaatcgtggccggcagcaccggggccgccgcggccggggcc
gccgcggcgaccgccggatcgtcgggcggggcgtccggtgcgggcggggccgccgccgcg
gagggactcggggccccggtgaaggcgggtgtcgcagccggtgtggtggcggtggccgcc
gccgtggtggcgctggccctcatggacgacggtcgtcccgcgaaggaggtcgcgaggccg
gagccgtccgtgccggtcgtgcagtccgagccgccgaagcccacacagcacgaggagaag
ccttcgccgcgtcctgtggtgctcgctcccgagcctgctcccacgcagaagccgtccccc
gtccccactccgcaccccaccccgacacccacgccgaccccgacgccgaaggcgcccccc
gcgcccaagtccgcgccgaccccgacaccaccgtccgcgccgacacccaccccgaccgcg
accgcgccacccaccccgacacccacgcctccgccacagccctccccgaccatctaccac
gtgagcgacctgcgctacgacatcggcggcgacggcacccggccggagatccggctgcgc
gagagcagctggctatggcggcggcacggcatgtccatcagcggcaagcagtacacgcgg
ggggtgaccgtccacggcgagtcctccgtcaccatcgctctcaaccgccagtgcaccgcc
tatgacgctctggccggcgtggacgacctgacgctgggcctcggcaaggtcaccttctcc
gtctatgccgacggggtccggctgtggcagtccggcccggtcaggggccgcgaccaggcc
gtacccgtccatgtcgacctgaccgggcgcacgaccgtgcggctcgccgtggagccgcac
aacaacgccttcgaccgggcggcactggcggactgggccgattcacggttcacctgccgg
tag
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