Streptomyces pluripotens: LK06_018505
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Entry
LK06_018505 CDS
T04845
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
splu
Streptomyces pluripotens
Brite
KEGG Orthology (KO) [BR:
splu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
splu03016
]
LK06_018505
Enzymes [BR:
splu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
LK06_018505
Transfer RNA biogenesis [BR:
splu03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
LK06_018505
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
ARP71604
UniProt:
A0A221P197
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All DBs
Position
4088684..4089256
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AA seq
190 aa
AA seq
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MRLFAAVLPPDDVARELAKEVARLKRLPGAERLRWTSRPGWHFTLAFYGEVADELVPGLS
ERLERAARRSAPLRLALSGGGQFGRGKILWTGAQGDVKALRLLAGRAEAAARRAGVPMTE
HRRYLAHLTLARGRDGADTRPCVAALADFTTRAWTVADLALVRSELPRSGVPGEQPRYET
VARWVLGGSG
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atgagactcttcgccgccgtcctgcccccggacgacgtcgcgcgtgaactcgccaaggaa
gtggcccggttgaagcggctgcccggtgccgagaggctgcgctggaccagccgccccggc
tggcacttcaccctcgccttctacggtgaggtcgccgatgaactcgtacccggcctgtcg
gaacgcctggagcgcgcggcccgccgctccgccccgctccggctggccctctccggcggc
ggccagttcgggcgcggcaagatcctctggacgggtgcccagggagacgtgaaggcgctg
cggctgctggccggccgggcggaggcggcagcccgcagggcgggcgtgccgatgacggag
caccgccggtacctggcccacctgacgctggcgcggggccgggacggagcggatacgcga
ccctgcgtggccgccctcgcggacttcaccacacgtgcctggaccgtggccgacctggcg
ctggtccgcagtgagctgccgaggtccggggtgccgggcgaacagccgcggtacgagacg
gtcgcccgttgggttctcggcgggtccggttag
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