Streptomyces pluripotens: LK06_022130
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Entry
LK06_022130 CDS
T04845
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
splu
Streptomyces pluripotens
Pathway
splu03420
Nucleotide excision repair
splu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
splu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LK06_022130
03430 Mismatch repair
LK06_022130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
splu03400
]
LK06_022130
Enzymes [BR:
splu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LK06_022130
DNA repair and recombination proteins [BR:
splu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LK06_022130
MMR (mismatch excision repair)
Other MMR factors
LK06_022130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
AAA_30
UvrD_C_2
Motif
Other DBs
NCBI-ProteinID:
ARP72203
UniProt:
A0A221P8V7
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All DBs
Position
4917821..4921372
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AA seq
1183 aa
AA seq
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MPARITDAEQLKELLGIPFTAEQTACITAPPAPQVIVAGAGSGKTTVMAARVVWLVGTGQ
VAPEQVLGLTFTNKAAGELAERVRKALVKAGVSAPGPLPSPGRPPSTTACGADTLWPDPD
DLPGEPVISTYHAFAGRLLTDHGLRIGLEPTSRLLADATRYQLAARVLREAPGPYPALTR
SFADLVGDLLNLDSELAEHLVDPEELRAWDADLLHTLQSARLTNADLRKVPETAAARREL
ADLVQRYRAAKRERDLLDFGDQIALSARLARIPEVGRMLREEFRVVLLDEYQDTSVAQRV
LLAGLFGAGTGHPVTAVGDPCQAIYGWRGASVANLDDFPTHFPQADGRPAPRQALSENRR
SGGRLLDLANGLAEPLRALHAGVEALRPAPGAERDGTVRCALLSTHTEEIDWLADSLAHL
VRTGTAPGEVAVLCRTATDFAEIQGALVARDIPVEVVGLSGLLHLPEVADLVAVCEVLQD
PGANAALVRLLTGPRWRIGPRDLALLGRRARMLVAHAVAADTDDPDRRLAAAVEGVDPSE
VISLADALDTFLETPMEGVFEQWGDDGLPFSPEARVRFARLAAELRELRRSLSDPLMDVL
HRVLAVTGLEVELSASPQALAARRRETLSNFLDVAASFAASDGEATLLAFLGFLRTAAQY
EKGLDNALPGGENTVKVLTAHKAKGLEWDVVAVPGLVNGTFPSAQGREKWTAQAKVIPHA
LRGDADTLPDVETWDSRGMKAFHEAMKDHQHTEELRLGYVTFTRPRSLLLGSGHWWGPSQ
KKPRGPSDFLQALHDHCAAGYGETEVWAEEPAEGEENPAVRGSAADHVWPLPLDADALAR
RRKAAGTVLAHLTAITAQDAGPPPAGDETVAEDPDWPPPPDDDVQGEAEPHGEAESRDQV
TAGASAPVPDGGLGDRGAQGTGRPRFPHQATAPQDRPLPEGPQQPTALSPEEARTVASWD
RDLDALTGELLRTRRTVTDVPLPVTLTASQLLLLAEDPDRLAQELARPMPRPPQPAARRG
TRFHAWVEARFEELTLPLLEPDELPGADAEIADERDLELLKDAFERTEYARRTPYRVETP
FQLSLAGRVVRGRIDAVYKNGDGADATYEIVDWKTNRTRTADPLQLAVYRLAWAEQQRVP
PESVTAAFLYVRSGEVVRPPDLPDRAALERLLTDGTQSVTETS
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcccgaatcaccgacgccgagcagctcaaggagctcctcggtatccccttcacc
gcggagcagacggcctgcatcaccgcgcccccggccccccaggtgatcgtggccggagcg
gggtcgggcaagaccaccgtcatggcggcccgtgtggtctggctggtcggcaccgggcag
gtcgctcccgaacaggtcctcggtctgaccttcaccaacaaggccgccggtgaactggcc
gaacgcgtccgaaaggcactggtcaaggccggtgtcagcgccccgggccccctcccgtca
cccggccggcccccctcgacgacagcatgtggtgccgacaccctctggccggacccggac
gacctgccgggtgagccggtcatctcgacgtaccacgccttcgccggccggctgctgacc
gaccacggcctgcgcatcggcctggaacccacctcccggctgctggccgatgccacccgc
taccagctcgcagcacgtgtactgcgcgaggcccccggaccctacccggcactgacccgc
tccttcgccgacctcgtcggcgacctgctcaacctcgactccgaactcgccgaacacctc
gtcgacccggaggaactgcgcgcctgggacgccgacctgctgcacaccctccagagcgcc
aggctcaccaacgccgacctgcgcaaggtccccgagacggccgcggcccgccgggagctc
gccgacctcgtgcagcgctaccgggccgccaagcgcgaacgggacctgctcgacttcggc
gaccagatcgccctgtccgcccggctcgcccgcatccccgaagtgggccgcatgctgcgc
gaggagttccgcgtggtgctcctggacgagtaccaggacacctccgtggcccagcgcgtc
ctgctggccgggctgttcggcgcgggcaccggtcaccccgtgaccgccgtcggcgatccc
tgccaggccatctacggctggcgcggcgcatccgtcgccaacctggacgacttccccacg
cacttcccccaggccgacggacgccccgccccccggcaggcgctcagtgagaaccgccgc
agcggtggccggctcctcgacctggccaacggcctcgccgagcccctgcgcgccctgcac
gcgggcgtggaggccctccgcccggcccctggtgccgaacgtgacggcacggtccgttgc
gccctgctgagcacgcacaccgaggagatcgactggctcgccgactccctcgctcacttg
gtgcgcaccggaacggcccccggtgaggtcgcggttctgtgccgcacggcgaccgacttc
gccgagatccagggtgccctcgtcgcccgtgacatccccgtcgaggtggtgggcctctca
ggactgctgcacctgcccgaggtcgccgacctggtcgccgtctgcgaagtcctccaggat
cccggcgccaacgccgccctggtgcgcctgctcaccggcccgcgctggcgcatcggcccc
cgcgacctcgccctgttgggccgccgtgcccgcatgctcgtcgcccacgcggtcgcggcc
gacaccgacgacccggaccgccggctcgccgccgccgtcgagggcgtcgacccgtccgag
gtgatatcgctcgcggacgccctcgacaccttccttgagacaccgatggagggcgtcttc
gagcagtggggcgacgacggcctgccgttctccccggaggcgcgcgtgcgcttcgcccgg
ctggccgccgaacttcgtgaactgcgtcgttccctgtccgatccgctgatggacgtgctg
caccgcgtgctcgccgtcaccggtctggaggtggagctgtccgcctccccgcaggccctg
gccgcgcgccgccgcgaaaccctgtcgaacttcctggacgtcgccgcctccttcgcggcg
agcgacggtgaggccaccctgctcgccttcctcggcttcctgcgcacagccgcccagtac
gagaagggcctcgacaacgctctgcctggcggcgagaacaccgtcaaggtgctcaccgcg
cacaaggccaagggcctggagtgggacgtcgtggccgtccctggactggtgaacggtacc
tttcccagcgcccagggccgcgagaagtggaccgcacaggccaaggtgatcccccacgcc
ctgcgcggtgacgccgacaccctgcccgacgtcgagacctgggactcgcgcggtatgaaa
gccttccacgaggccatgaaggaccaccagcacaccgaggagctccgcctcggttacgtc
accttcacccggccccgatccctgttgctcggctccggccactggtggggacccagtcag
aagaagccccgaggcccgtccgacttcctccaggccctgcacgaccactgcgccgccggg
tacggcgagaccgaggtctgggcggaggaacccgccgagggtgaggagaacccggccgtg
cgcggttccgctgccgaccacgtgtggccgctcccgctggacgccgacgccctggcccgc
cgccggaaggcggccgggaccgtgctcgcccacctgacggcgatcaccgcgcaggacgcc
ggcccaccgccggccggcgacgagaccgtcgccgaagacccggattggcccccgccgccg
gacgacgatgtccagggcgaagcagagccccacggcgaagcggagtcgcgcgaccaagtc
actgccggggcttctgcgccggtaccggacggcggtctgggcgaccggggcgcccagggc
accggccggccgagatttccccaccaggcgaccgccccgcaggaccgccccctccccgag
gggccgcagcagcccaccgccctcagtccggaggaggcccgtaccgtcgcctcctgggac
cgggacctggacgcgctcaccggagagctgctgcgcacccggcggaccgtcacggacgtc
ccgctgcccgtcacgctgaccgcttcccagctgttgctgctggccgaggacccggaccgg
cttgcacaggaactcgcgcgccctatgccacgccctccgcaaccggccgcgcgccggggc
acccgatttcatgcctgggtcgaagcgcgcttcgaggagctgacgctgcccctgctcgaa
ccggacgagttgcccggcgccgatgccgagatcgccgacgaacgcgacctggagctcttg
aaggacgcgttcgaacgcaccgagtacgcccggcgaactccgtaccgggtcgagactccc
ttccagctcagccttgccggccgcgtcgtacggggccgcatcgacgccgtctacaagaac
ggtgatggggccgatgcgacctacgagatcgtggactggaagaccaaccgcacccgcacc
gccgacccgctccagctcgccgtgtaccggctggcctgggccgaacaacaacgcgtaccg
cccgagtccgtcacagccgccttcctgtacgtacgcagcggtgaggtcgtgcgcccgccg
gacctgcccgaccgggcggcgctggagcggctgctcacggacgggacgcaatcagtgacg
gagacgtcctga
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