Streptomyces pluripotens: LK06_024215
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Entry
LK06_024215 CDS
T04845
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
splu
Streptomyces pluripotens
Pathway
splu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
splu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LK06_024215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
splu03400
]
LK06_024215
Enzymes [BR:
splu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
LK06_024215
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LK06_024215
DNA repair and recombination proteins [BR:
splu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LK06_024215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
DZR
NFACT_N
Anti-TRAP
Motif
Other DBs
NCBI-ProteinID:
ARP72542
UniProt:
A0A221P424
LinkDB
All DBs
Position
5377561..5378445
Genome browser
AA seq
294 aa
AA seq
DB search
MPELPEVEVVRRGLERWVAHRAVAEVEVLHPRAVRRHVAGADDFAHRLKGRHIGTPHRRG
KYLWLPLEETDQSVLAHLGMSGQLLVQPHEAPDERHLRIRIRFADGLGTELRFVDQRTFG
GLSLHDNTPDGLPDVIAHIARDPLDPLFDEEAFHQALRRKRTTIKRALLDQSLISGVGNI
YADEALWRARIHYERPTASFTRPVTAELLGQVRDVMNEALAVGGTSFDSLYVNVNGESGY
FDRSLDAYGREGLPCKRCGTSVRRRPWMNRSSYFCPKCQRPPRARTAAGPTGPR
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagttgcccgaggtcgaggtcgtccggcgcggtctggagcggtgggtcgctcat
cgcgccgtcgccgaggtcgaggtgctgcacccgcgtgccgtacgacggcatgtcgcgggc
gccgacgacttcgcgcaccggctcaagggccggcacatcgggacgccccaccggcgcggc
aagtatctgtggttgccgctggaggagacggatcagtccgtcctggcgcacctggggatg
agcggccagctgctggtacagccgcacgaggcaccggacgagcggcatctgcgcatcagg
atccggttcgccgacgggctcggcacggaactccgcttcgtcgaccagcggaccttcggc
gggctgtcgttgcacgacaacacccctgacggcctgcccgacgtcatcgcgcacatcgcg
cgtgatccgctcgacccgctgttcgacgaggaggccttccaccaggccctgcgccgcaag
cgcacgaccatcaaacgggctctgctggaccagtcgttgatcagcggagtgggcaacatc
tacgcggacgaggcgctgtggcgcgcccgcatccactacgagcgtccgacggcgagcttc
acccgcccggtcacggctgaactcctgggtcaggtacgggatgtgatgaacgaggccctc
gccgtcggaggcaccagtttcgacagcctgtatgtcaacgtcaacggtgagtccggctac
ttcgaccgttccctggacgcgtacggccgcgagggtctgccctgcaaacggtgcggtacg
tccgtgcgccgccgcccctggatgaaccgctccagctacttctgcccgaagtgccagcga
ccgccgcgagcccggacggcggccggaccgaccggaccgcgctga
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