Streptomyces pluripotens: LK06_024795
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Entry
LK06_024795 CDS
T04845
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
splu
Streptomyces pluripotens
Pathway
splu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
splu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LK06_024795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
splu03019
]
LK06_024795
03016 Transfer RNA biogenesis [BR:
splu03016
]
LK06_024795
Enzymes [BR:
splu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
LK06_024795
Messenger RNA biogenesis [BR:
splu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
LK06_024795
Transfer RNA biogenesis [BR:
splu03016
]
Prokaryotic type
tRNA degradation factors
LK06_024795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
KH_PNO1_2nd
KH_2
KH_KhpA-B
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
ARP72643
UniProt:
A0A221P3W9
LinkDB
All DBs
Position
5513997..5516222
Genome browser
AA seq
741 aa
AA seq
DB search
MENETHYAEAVIDNGAFGTRTIRFETGRLAKQAAGSAVAYLDDDTMVLSATTASKNPKDQ
LDFFPLTVDVEERMYAAGKIPGSFFRREGRPSEDAILTCRLIDRPLRPSFKKGLRNEIQI
VATIMALNPDHLYDVVAINAASASTQLAGLPFSGPIGGVRVALIRGQWVAFPTHTELEDA
AFDMVVAGRVLEDGDVAIMMVEAEATEKTIKLVEGGAEAPTEEVVASGLEAAKPFIKVLC
RAQADLAAKAAKPVGEFPIFLDHQDDVLEALTAAVKPELSQALTIAGKQEREAELDRVKA
LAAEKLLPEFEGREKEISAAYRSLTKTLVRERVIKEKKRIDGRGVTDIRTLAAEVEAIPR
VHGSALFERGETQILGVTTLNMLRMEQQLDTLSPVTRKRYMHNYNFPPYSTGETGRVGSP
KRREIGHGALAERALVPVLPTREEFPYAVRQVSEALGSNGSTSMGSVCASTMSLLNAGVP
LKAPVAGIAMGLISQEIDGETHYVTLTDILGAEDAFGDMDFKVAGTKDFVTALQLDTKLD
GIPASVLAAALKQARDARLHILDVMMEAIDRPDEMSPHAPRIITVKIPVDKIGEVIGPKG
KMINQIQEDTGAEITIEDDGTIYIGAADGPSAEAARTTINGIANPTMPEVGERYLGTVVK
TTTFGAFVSLLPGKDGLLHISQIRKLAGGKRVENVEDVLGVGQKVQVEIAEIDSRGKLSL
VPVIEGEESSSDETKKDDADQ
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
gtggagaacgagacccactacgccgaggctgtcatcgacaacggcgccttcggcacccgt
acgatccgcttcgagacgggccgcctggccaagcaggccgccggttccgccgtggcctac
ctggacgacgacaccatggtgctgtcggccaccaccgcctccaagaaccccaaggaccag
ctcgacttcttcccgctcacggtggacgtcgaggagcggatgtacgccgccggcaagatc
cccggcagcttcttccgccgcgagggccggccgagtgaggacgcgatcctcacctgccgc
ctcatcgaccgcccgctgcgcccgtccttcaagaagggcctgcgcaacgagatccagatc
gtcgccacgatcatggcgctcaaccccgaccacctgtacgacgtcgtggcgatcaacgcc
gcgtccgcgtccacccagctggccggtctgcccttctccggcccgatcggcggcgtccgc
gtcgcgctgatccgcggccagtgggtcgccttcccgacgcacaccgagctggaggacgcc
gccttcgacatggtcgtcgcgggtcgtgtcctggaagacggcgacgtcgcgatcatgatg
gtcgaggccgaggccaccgagaagaccatcaagctggtcgagggcggcgccgaggcgccg
accgaggaggtcgttgcctccggtctggaggccgcgaagcccttcatcaaggtcctgtgc
cgcgcccaggccgacctcgccgccaaggccgccaagccggtcggcgagttcccgatcttc
ctggaccaccaggacgacgtcctggaagccctgaccgccgcggtcaagccggagctgtcc
caggcgctcaccatcgccggcaagcaggagcgcgaggccgagctggaccgcgtcaaggca
ctcgccgccgagaagctcctgccggagttcgagggccgcgagaaggagatctccgccgcg
taccgctcgctcaccaagaccctggtccgcgagcgcgtgatcaaggagaagaagcgcatc
gacggccgcggtgtcaccgacatccgtaccctggccgccgaggtcgaggccatcccgcgg
gtgcacggctcggcgctgttcgagcgcggtgagacccagatcctgggtgtcaccaccctc
aacatgctgcgcatggagcagcagctggacaccctctccccggtgacccgcaagcgctac
atgcacaactacaacttcccgccgtactccaccggtgagaccggtcgcgtcggctccccg
aagcgccgcgagatcggccacggtgccctggccgagcgtgccctggttccggtcctgccg
acccgcgaggagttcccctacgcggtccgccaggtgtccgaggccctcggctccaacggc
tcgacgtccatgggctcggtctgcgcctccaccatgtcgctgctgaacgccggtgtgccg
ctgaaggccccggtcgccggtatcgccatgggcctgatctcccaggagatcgacggcgag
acgcactacgtcaccctcaccgacatcctcggtgccgaggacgccttcggcgacatggac
ttcaaggtcgccggcacgaaggacttcgtgaccgccctccagctcgacaccaagctggac
ggcatcccggcctccgtcctggccgcggccctcaagcaggcccgcgacgcccgcctgcac
atcctcgacgtgatgatggaggccatcgaccggcccgacgagatgtccccgcacgccccg
cggatcatcaccgtcaagatcccggtcgacaagatcggtgaggtcatcggccccaagggc
aagatgatcaaccagatccaggaggacacgggcgccgagatcaccatcgaggacgacggc
acgatctacatcggcgccgccgacggcccctccgccgaggctgcccgcaccacgatcaac
ggcatcgccaacccgacgatgcccgaggtcggcgagcgctacctcggcacggtcgtcaag
acgaccaccttcggtgcgttcgtctccctgctgcccggcaaggacggtctgctgcacatc
tcgcagatccgcaagctcgccggcggcaagcgcgtggagaacgtggaggacgtcctcggc
gtgggccagaaggtccaggtcgagatcgccgagatcgactcccgtggcaagctctccctc
gttccggtgatcgagggcgaggaaagctcttccgacgagacgaagaaggacgacgccgac
cagtga
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