Streptomyces pluripotens: LK06_025170
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Entry
LK06_025170 CDS
T04845
Name
(GenBank) recombinase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
splu
Streptomyces pluripotens
Pathway
splu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
splu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LK06_025170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
splu03019
]
LK06_025170
03400 DNA repair and recombination proteins [BR:
splu03400
]
LK06_025170
Enzymes [BR:
splu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LK06_025170
Messenger RNA biogenesis [BR:
splu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LK06_025170
DNA repair and recombination proteins [BR:
splu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LK06_025170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
RecQ_Zn_bind
Pribosyltran
SWI2_SNF2
MCM_bind
Motif
Other DBs
NCBI-ProteinID:
ARP72700
UniProt:
A0A221P3V1
LinkDB
All DBs
Position
complement(5610512..5612677)
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AA seq
721 aa
AA seq
DB search
MEHTSNADLRAAADAVLARLVGDSTGTARLREDQWQAIEALVADRRRALVVQRTGWGKSA
VYFVATSLLRARGSGPTVIVSPLIALMRNQVEAAARAGIRARTINSANTEEWEDVRAAIE
AGGVDVLLVSPERLNNPDFRDQVLPKLSAATGLLVVDEAHCISDWGHDFRPDYRRLRTVL
GDLPPGVPVLATTATANARVTADVAEQLGTGAASDALVLRGPLDRESLSLGVLQLPDAAH
RMAWLADHLGDLPGSGIVYTLTVAAAEEVTAFLRQHGHTVASYTGRTENAERQQAEDDLL
ANRVKALVATSALGMGFDKPDLGFVVHLGSPSSPIAYYQQVGRAGRGVEHAEVLLLPGKE
DEAIWQYFASLAFPSEDRVRCTLDILAQADRPLSLPALEPLVDLRRSRLETMLKVLDVDG
AVRRVKGGWVATGEPWSYDAERYDWVARQRAAEQQAMRAYASTAACRMEFLQRQLDDEGA
APCGRCDNCAGPRFAIETSVAALEAARNDLGRAGVEVEPRRMWPTGLQAAGIDLKGRIPV
GEQAAPGRALGRLSDIGWGNRLRPLLASGAPDAPVPDDVARAVVDVLADWARGPAGWASG
ASDAQARPVGVVTVASRTRPRLIHSLGARIAEIGHLPLLGSVEYSGEVPRVPRSNSAQRL
KALDGALVVPPALVSVLAEVQGPILLVDDRTETGWTLAVAARLLRRSGAQGVLPLVLAVQ
G
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggagcacacgagtaacgcggacctccgagcagcggccgacgccgtcctggccaggctc
gtcggggacagcacgggcacggcccggttgcgcgaggaccagtggcaggcgatcgaggcg
ctggtcgccgaccggcgccgggctctcgtcgtacagcgcacgggatggggcaagtccgcg
gtgtacttcgtggcgacctcgctgctgcgggccagagggagcgggcccaccgtgatcgtc
tcacccctgatcgcgctcatgcgcaaccaggtggaggccgcggcccgggccggtatccgc
gcccggaccatcaactccgccaacaccgaggagtgggaagacgtccgggccgcaatcgag
gcgggtggcgtggatgtcctgctcgtcagccccgagcgcctgaacaaccccgacttccgt
gaccaggtcttgcccaagctctccgcagcgaccggcctgctggtcgtggacgaggcccac
tgcatctccgactggggccacgacttccgtcccgactaccgacgactgcgcaccgtgctc
ggcgacctcccgcccggcgtgcccgtgctggccaccactgcgacggccaacgctcgggtg
accgcggacgtcgccgagcaactgggcaccggcgccgcctcggacgccctggtgctgcga
ggcccgttggaccgggagagtctgagcctcggcgtactgcagttgccggacgcggcacac
cggatggcctggctcgccgaccacctcggcgacctgccgggttccggcatcgtctacacg
ctcaccgtcgccgcagccgaggaggtcaccgcctttctgcggcagcacgggcacaccgtc
gcctcgtacacggggaggacggagaacgccgaaaggcagcaggccgaggacgatctgctc
gccaaccgggtcaaggccctggtggccacctccgccttgggtatgggcttcgacaagccc
gacctgggcttcgtggtccacctcggttctccctcctcccctatcgcctactaccagcag
gtgggccgggccggtcgcggtgtcgagcacgccgaggtactgctgcttccgggtaaggag
gacgaggcgatctggcagtacttcgcatcactggccttcccctccgaggatcgggtccgg
tgcacgttggacatcctcgcccaggccgacaggcccttgtcgctgcctgctctggagccc
cttgtcgacctgcgccgctcacggctggaaaccatgctgaaggttctcgacgtggacgga
gccgtgaggcgggtcaagggcggctgggtcgcaaccggtgaaccttggtcgtacgacgcc
gagcgctacgactgggtcgctcggcagcgggcagccgagcagcaggcgatgcgcgcctac
gcgtccaccgccgcatgtcggatggagtttctgcagcgccagttggacgacgagggcgcc
gcaccgtgcggccgttgcgacaactgcgcggggccacgcttcgccatcgagacctccgtg
gccgcgctggaggccgcccggaacgacctgggccgcgccggagtcgaggtcgagccacgt
cgtatgtggccgacgggcctccaggcggccggtatcgatctcaagggacgaatcccggtt
ggtgaacaggccgcgccggggcgggctctgggacggctgtcggacatcggctggggcaat
cggctgcgtccactcctcgcctccggggcgccggacgcgcccgtgccggacgacgtggcg
agagccgtggtggacgtactggccgactgggccagaggccctgccggctgggcctccggt
gcatccgacgcccaggcccgacccgtgggggtggtcaccgtcgcctcgcgcacccggccc
cggctgatccattccctgggcgcccggatcgctgagatcggccacctgcctctactcggt
tccgtggagtactccggggaagtaccccgggtacctcgcagcaacagcgcgcaacggctg
aaggccctcgacggcgcgttggtggtaccgcccgccctcgtatcggtgctcgccgaggtg
cagggtcccatcctgctggtcgacgaccgcacggagaccggctggaccctcgcggtcgcg
gcccgtctgctcagaaggtccggcgcgcagggggtgttgccgttggtcctcgccgtccag
ggctga
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