Sphingosinithalassobacter sp. LHW66-3: ACQ450_07930
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Entry
ACQ450_07930 CDS
T11658
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
splw Sphingosinithalassobacter sp. LHW66-3
Pathway
splw03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
splw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ACQ450_07930 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
splw03400
]
ACQ450_07930 (uvrB)
DNA repair and recombination proteins [BR:
splw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACQ450_07930 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ACQ450_07930 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_16
UB2H
DUF87
SWI2_SNF2
Kinesin
AAA_22
PH_15
FATC
Motif
Other DBs
NCBI-ProteinID:
XUM81996
LinkDB
All DBs
Position
complement(1625747..1627936)
Genome browser
AA seq
729 aa
AA seq
DB search
MAIQIRTTLDEPETGESFVPHRPQRPEKAEGGKKFKLISDYEPSGDQRTAIPELVEQARA
GERDQVLLGVTGSGKTFTMAKVIEALQRPALVLAPNKILAAQLYGEFKSFFPENAVEYFV
SYYDYYQPEAYVPRTDTYIEKESSINEAIDRMRHSATRALLERDDVLIVASVSCLYGIGS
VETYSAMIFDLKKGQVVDQREIIRKLVALQYKRNEAAFVRGTFRVRGDSLEIFPSHYEDT
AWRVSFFGDDIEEIVEFDPLTGAKVATLDHIRVYANSHHVTPGPTLKQAMEAIKHELAER
LKELEIEGRLLEAQRLEQRTNFDLEMIAATGSCAGIENYSRFLTGRLPGEPPPTLFEYLP
ENALLFVDESHQTVPQIGAMARGDHRRKITLAEHGFRLPSCIDNRPLRFNEWDAMRPQTV
SVSATPGGWEMEQTGGVFVEQVIRPTGLIDPPVEIRPVEEQVQDLIQECRATAAKGYRTL
VTTLTKRMAEDLTEYMHEAGIKVRYMHSDVETLERIELIRDLRMGVYDVLIGINLLREGL
DIPECGLVAILDADKEGFLRSETSLIQTIGRAARNVEGRVILYADRMTGSMERALGETSR
RREKQEAYNAEHGITPETVKKNIGDIIAHVSSKDQVTVEIDADRPHMVGHNLRAYIEELE
KKMRDAAANLEFEEAARLRDQIRQLENEELGLPAGEHKAPVMGRSNEGKPGTRKTRYGKV
QRKFGGGRR
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atggcaatccagattcgcaccaccctcgacgagccggaaaccggcgagagcttcgttccg
catcgcccgcagcggcccgagaaggccgagggcggcaagaagttcaagctcatctctgat
tatgagccctcgggcgaccagcgcaccgcgatcccggagctggtggaacaggcccgcgcg
ggcgagcgcgaccaggtgctgctgggcgtcacgggctccggcaagaccttcaccatggcc
aaggtgatcgaggcgcttcagcgccccgcgctggtgctcgcgccgaacaagatcctcgcc
gcgcagctctatggcgagttcaagagcttcttccccgagaatgcggtcgaatatttcgtc
agctattacgactattaccagccggaggcgtacgtcccgcgcaccgacacctatatcgag
aaggaaagctcgatcaacgaggcgatcgatcggatgcgccattcggcgactcgcgcactg
ctcgagcgtgacgacgtgctgatcgtcgcatcggtgtcctgcctctacggcatcggctcg
gtcgaaacctattcggcgatgatcttcgacttgaagaaggggcaggtggtcgatcagcgc
gagatcatccgcaagctcgtcgcgctgcaatacaagcgcaacgaggccgctttcgtgcgc
ggcaccttccgcgtgcgcggcgacagcctcgaaatcttcccctcgcattatgaagacacc
gcctggcgcgtgtctttcttcggcgacgatattgaggagatcgtcgagttcgatccgctc
actggtgccaaggtggccactctcgaccacatccgcgtctatgcgaactcgcaccatgtc
acgcccggtccgacgctcaagcaagcgatggaggcgatcaagcacgagcttgccgagcgg
ctgaaggagctggagatcgagggccggctgctcgaggcgcagcggctggagcagcgcacg
aatttcgacctcgagatgatcgccgcaaccggaagctgcgcgggaatcgagaattacagc
cgctttctcaccggtcgcctgcccggcgagccgccgccgactctgttcgagtatctgccc
gagaatgcgctgcttttcgttgacgaaagccatcagaccgtgccgcagatcggcgcgatg
gcgcgcggcgaccaccgccgcaagatcacgctggccgaacacggcttccgccttcccagc
tgcatcgacaatcgcccgctgcggttcaacgaatgggatgcgatgcgcccgcagacggtc
agcgtctcggcgacgcccggcggctgggaaatggagcagaccggcggcgtattcgtcgaa
caggtgatccggcccaccgggctgatcgatccgccggtggaaatccgtccggttgaggaa
caggtccaggacctgatccaggagtgccgcgccactgccgcaaaaggctatcgtacactg
gtgactacgctcaccaagcgcatggccgaagacctcaccgaatatatgcacgaagccggc
atcaaggtccgctacatgcactcggacgtcgagacgctggagcggatcgagctgatccgc
gacctgcggatgggcgtctatgacgtgctgatcggcatcaacctgctgcgcgaggggctc
gacatccccgaatgcgggctggtggcgatcctcgacgccgacaaggaaggattcctgcgt
tcggagacctcgctgatccagacgatcggccgcgccgcccgcaacgtcgaggggcgggtg
atcctctatgccgaccggatgaccggcagcatggagcgcgcgctgggcgaaaccagccgc
cgccgcgagaagcaggaagcgtataatgccgagcacggcatcacgcccgagacggtgaag
aagaacatcggcgacatcatcgcccatgtctccagcaaggatcaggttaccgtcgagatc
gacgcggatcggccgcacatggtgggccataatctgcgcgcctatatcgaggagctggag
aagaagatgcgcgatgcggccgccaatctcgaattcgaggaagcggctcggctgcgcgat
cagatccgccagctcgagaacgaggaactcggcctgcccgccggcgagcacaaggcgccg
gtcatgggtcgttccaacgaaggaaagccgggcacccgcaagacgcgctatggcaaggtc
cagcgcaagttcggcggtggccggcgctga
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