Serratia inhibens: Q5A_000675
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Entry
Q5A_000675 CDS
T04576
Name
(GenBank) hypothetical protein
KO
K03628
transcription termination factor Rho
Organism
sply
Serratia inhibens
Pathway
sply03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sply00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Q5A_000675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sply03021
]
Q5A_000675
03019 Messenger RNA biogenesis [BR:
sply03019
]
Q5A_000675
Transcription machinery [BR:
sply03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
Q5A_000675
Messenger RNA biogenesis [BR:
sply03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Q5A_000675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
S1CSD-TOTE-2
AAA_22
OB_RNB
AAA_25
AAA
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
ANS40654
LinkDB
All DBs
Position
156467..157726
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTELKNTPVSELITLGENMGLENLARMRKQDIIFSILKQHAKSGEDIFGDGVLEILQD
GFGFLRSGDSSYLAGPDDIYVSPSQIRRFNLRTGDSVSGKIRPPKEGERYFALLKVNEVN
YDKPENARSKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLASPIGRGQRGLIVAPP
KAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVIASTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF
FGAARNVEEGGSLTIIATALVDTGSKMDEVIYEEFKGTGNMELHLARKIAEKRVFPAIDY
NRSGTRKEELLTTSEELQKMWILRKIIHPMGEIDAMEFLINKLAMTKTNDEFFDMMKRS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttaccgaattaaagaatacgccggtttctgagctgattactctcggcgaaaat
atggggctggaaaaccttgcccgtatgcgcaagcaggacattatcttctccatccttaag
cagcatgcgaaaagtggagaagatatcttcggcgatggcgtgttggagatattgcaggat
ggatttggtttcctccgctctggagacagttcctaccttgcaggccccgacgacatctac
gtatcccctagccaaatccgccgtttcaacctccgtacaggtgactccgtttccggtaag
attcgtccgccaaaagaaggcgagcgctattttgccctgttgaaagttaatgaagtcaac
tacgacaaaccggaaaacgcccgcagcaagatcctgttcgagaacttgaccccgctgcat
gccaactcccgtctgcggatggaacgtggcaacggttcaaccgaagacctgacggcgcgc
gtgctggacctggcttctccgattggccgtggccagcgtggcctgattgttgctccaccg
aaagccggtaaaaccatgctgctgcagaacattgcgcagagcatcgcctacaaccatcca
gactgcgtgttgatggtgctgctgatcgacgagcgtccggaagaagtgaccgagatgcag
cgtctggtgaagggtgaagtcatcgcctctacctttgacgagccggcttcccgtcacgtc
caggttgcggaaatggtgatcgagaaggccaagcgcctggttgagcacaagaaagacgtt
atcatccttcttgactccatcacccgtttggcacgtgcctacaacaccgttgtgcctgcc
tccggtaaagtgctgaccggtggtgtggacgccaacgccctgcatcgtcctaagcgtttc
ttcggtgcggcacgtaacgttgaggagggcggtagcctgaccatcatcgctactgcgctg
gtagataccggttccaaaatggacgaggttatctacgaagagtttaaaggtaccggcaac
atggaattgcacctggcgcgtaaaatcgccgagaagcgcgtattccctgcgatcgactac
aatcgctccggtacccgtaaagaagagttactcaccacgtctgaagaactgcaaaaaatg
tggatcctgcgtaaaatcattcacccaatgggcgagattgatgcgatggagttcctcatt
aacaagttggccatgaccaagaccaatgatgaattcttcgatatgatgaagcgctcataa
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