Serratia inhibens: Q5A_000800
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Entry
Q5A_000800 CDS
T04576
Symbol
dapF_1
Name
(GenBank) Diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
sply
Serratia inhibens
Pathway
sply00300
Lysine biosynthesis
sply00470
D-Amino acid metabolism
sply01100
Metabolic pathways
sply01110
Biosynthesis of secondary metabolites
sply01120
Microbial metabolism in diverse environments
sply01230
Biosynthesis of amino acids
Module
sply_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sply00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Q5A_000800 (dapF_1)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Q5A_000800 (dapF_1)
Enzymes [BR:
sply01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
Q5A_000800 (dapF_1)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
CntK_N
Motif
Other DBs
NCBI-ProteinID:
ANS40675
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Position
182003..182827
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AA seq
274 aa
AA seq
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MQFSKMHGLGNDFMVVDAVTQNVYFSPELIRRLADRHLGVGFDQMLVVEPPYDPELDFHY
RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTQTGRMVLSVTDDDLVCVNMGE
PNFDPQAVPFRATKEERTYIMRAAEHTVLCGVVSMGNPHCVLQVDDVKTAKVELLGPVLE
GHERFPERANIGFMQIVSREHIKLRVYERGAGETQACGSGACAAVAVGIQQELLSEEVHV
ELPGGSLHIRWKGPGNPLFMTGPATHVYDGFIHL
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcagttctccaaaatgcacggtctgggcaacgactttatggtggtcgatgccgttaca
cagaatgtctatttttcacctgaactgatccgccgattggccgatcggcacttgggcgtt
ggctttgaccagatgctggtggtagaaccgccttacgatccggaacttgatttccactac
cgcatattcaacgccgacggcagtgaagtggcgcagtgcggtaatggcgcccgctgtttc
gcccgctttgtgcggctgaaagggctgaccaacaaacgcgacatccgcgtcagcacccaa
accgggcgcatggtgcttagcgtcaccgacgacgatctggtgtgcgtgaatatgggcgaa
ccgaattttgatcctcaggcggtgccgtttcgcgccaccaaagaggaaaggacatacatc
atgcgtgcggcggaacataccgtgctgtgcggcgtggtgtcgatgggcaatccacattgt
gttttacaggtggatgatgtaaaaaccgccaaggtagagctgcttggaccggtgctggaa
gggcatgagcgtttcccggagcgggccaatatcggttttatgcaaatcgtcagtcgtgaa
cacatcaagctgcgggtctatgaacgcggtgccggtgaaacgcaggcctgcggcagcgga
gcctgtgcggcagtggccgtggggattcaacaggaattgctgtcagaagaggtgcacgta
gaactgccgggtggcagcctgcatattcgctggaaagggccaggcaatccgctgtttatg
accggtccggcaacccatgtatatgacggatttattcatctatga
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