Serratia inhibens: Q5A_001190
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Entry
Q5A_001190 CDS
T04576
Symbol
fadB
Name
(GenBank) Fatty acid oxidation complex subunit alpha
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
sply
Serratia inhibens
Pathway
sply00071
Fatty acid degradation
sply00280
Valine, leucine and isoleucine degradation
sply00310
Lysine degradation
sply00362
Benzoate degradation
sply00380
Tryptophan metabolism
sply00410
beta-Alanine metabolism
sply00640
Propanoate metabolism
sply00650
Butanoate metabolism
sply00907
Pinene, camphor and geraniol degradation
sply00930
Caprolactam degradation
sply01100
Metabolic pathways
sply01110
Biosynthesis of secondary metabolites
sply01120
Microbial metabolism in diverse environments
sply01200
Carbon metabolism
sply01212
Fatty acid metabolism
Module
sply_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
sply00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
Q5A_001190 (fadB)
00650 Butanoate metabolism
Q5A_001190 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
Q5A_001190 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
Q5A_001190 (fadB)
00310 Lysine degradation
Q5A_001190 (fadB)
00380 Tryptophan metabolism
Q5A_001190 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
Q5A_001190 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
Q5A_001190 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Q5A_001190 (fadB)
00930 Caprolactam degradation
Q5A_001190 (fadB)
Enzymes [BR:
sply01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
Q5A_001190 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
Q5A_001190 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
Q5A_001190 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
Q5A_001190 (fadB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
ANS40753
LinkDB
All DBs
Position
complement(260281..262470)
Genome browser
AA seq
729 aa
AA seq
DB search
MLYQGETLQLHWLDNGIAELVFNAPGSINKLDTRTVASLGEALDVLEKQTELKGLLVRSG
KAAFIVGADITEFLSLFAAPAEKLHQWLAFANATFNRLEDLPVPTISAINGYALGGGCEC
ILATDFRVASPDARIGLPETKLGIMPGFGGSVRLPRLLGNDSALEIIAAGKDVSAKDALK
VGLVDAVVAPEKLVEAALKMLQQAIDGQLDWRAYRQPKLDPLKLSPIEAAMSFTTAKGMV
LQTAGKHYPAPMTAVKTIEAAARLGRDEALKLETASFVPLARSKEARALVGIFLNDQFVK
SQAKKLAKNVEAPKQAAVLGAGIMGGGIAYQSALKGVPVIMKDISDKSLALGMNEAAKLL
NKQLERGKLDGLKMAQVLSTIQPTLDYAGIERAQVIVEAVVENPKIKAAVLSEVEGLIGE
NTVLASNTSTIPINHLAKSLQRPQNFCGMHFFNPVHRMPLVEIIRGEQTSDSTIAAVVAY
ATRMGKTPIVVNDCPGFFVNRVLFPYFAGFSMLLRDGADFRQIDKVMEKQFGWPMGPAYL
LDVVGIDTAHHAQAVMAAGFPERMGKDYRDAIDVMFDNQRFGQKNQLGFYRYSQDNKGKP
RKDNDEQTDALLAAVSQPRQTISDEEIIARMMIPMINEVVRCLEENIIASPAEADMALVY
GIGFPPFHGGAFRYLDTLGTANYVELAQRYAHLGALYQVPAGLRAKAERNESYYPVATPL
SDIATGQPA
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgctctaccaaggcgaaacattacaactgcactggctcgataacggcatcgccgagctg
gtgttcaatgccccaggttcgataaacaagctggacactcgcaccgttgccagcctgggc
gaagcactagacgtactggaaaaacagaccgaactgaaagggctgctggtgcgttccggc
aaggccgcatttattgtcggcgccgatattaccgaattcctttcgctgttcgctgctccg
gctgaaaaactgcaccaatggctggcctttgccaacgcgacctttaaccggttggaagat
ttgccggtcccgaccatttcggccattaacggttacgcgctcggcggtggctgcgaatgt
attctggcaaccgacttcagggtcgcttcgcctgatgcgcgcattggcctgccggaaacc
aaactgggcattatgccgggcttcggcggttcagttcgcttgccacgcctgttgggtaac
gatagcgcgctggagatcatcgccgccggtaaagacgtcagcgccaaagatgcgctgaag
gtcggtttggtggatgcagtggttgccccggaaaaactggtagaagcagcgctgaaaatg
ctgcaacaggcaattgatggccagttggactggcgcgcctaccgccaaccgaaactcgac
ccgttgaaactcagcccaatagaagcggccatgagcttcaccaccgccaaaggcatggtg
ctgcaaaccgcaggtaaacattatccagcgccgatgaccgcggtgaaaaccatcgaagcc
gccgccaggttgggccgcgatgaagcattgaaactggaaaccgccagctttgtgcctttg
gcccgttccaaagaagcgcgcgcactggtcggtatcttcctcaacgatcagtttgtgaaa
agccaggcgaaaaagctggccaaaaacgtggaagcgccgaaacaggctgcggttctgggc
gcaggtatcatgggcggcggcatcgcttaccagtccgcgctgaaaggcgtgccggtgata
atgaaagacatcagcgacaaatccctggcgctcggcatgaatgaagctgccaagttgctg
aacaaacagttggagcgcggcaagctggatggcctgaagatggctcaagtgctgtcgacc
attcaaccgacgctggattatgccggtatcgaacgcgcgcaagtgatcgttgaagccgta
gtcgagaatccgaagattaaagcggcggtgctgtccgaggtggaaggcctgatcggtgaa
aataccgtacttgcatccaatacctcgaccattccaatcaatcacctggcaaaatcgctg
caacgcccgcaaaatttctgcggtatgcacttctttaacccggtgcaccgcatgccactg
gttgaaatcatccgcggcgagcagaccagcgacagcaccatcgccgccgtggtggcctac
gccacccggatgggcaaaacgccgatcgtggttaatgattgcccgggcttcttcgtcaac
cgcgtgctgttcccctattttgccggctttagcatgctgttgcgcgatggagcggatttc
cgccaaatcgataaggtgatggaaaaacagtttggctggccaatgggcccggcttacctg
ctcgacgtggtggggatcgataccgcgcaccatgcccaggcggtgatggctgccggtttc
ccggaacgtatgggcaaagattatcgcgacgccatcgacgtgatgttcgacaaccagcgc
tttggtcagaaaaaccagttgggtttctaccgttacagccaggacaacaaaggcaagccg
cgtaaagacaacgatgagcagaccgatgcgctgttggccgcagtctcccagccgcgccag
accatcagcgacgaagaaattatcgcccgaatgatgatcccgatgatcaacgaagtggtg
cgctgcctggaagagaacatcatcgccagcccggcagaagccgatatggcactggtttac
ggcattgggttccctccgttccacggtggggcattccgttacctggatacccttggcacc
gccaactatgtcgaactggcccagcgttacgcgcatcttggcgctctgtatcaagtgcct
gccggcctgcgcgccaaagctgaacgtaatgaaagctactacccggtggcgacgccgttg
tccgatatcgctactggccaaccggcatga
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