Serratia inhibens: Q5A_001585
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Entry
Q5A_001585 CDS
T04576
Symbol
groL
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sply
Serratia inhibens
Pathway
sply03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sply00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Q5A_001585 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sply03019
]
Q5A_001585 (groL)
03110 Chaperones and folding catalysts [BR:
sply03110
]
Q5A_001585 (groL)
03029 Mitochondrial biogenesis [BR:
sply03029
]
Q5A_001585 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sply04147
]
Q5A_001585 (groL)
Enzymes [BR:
sply01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Q5A_001585 (groL)
Messenger RNA biogenesis [BR:
sply03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Q5A_001585 (groL)
Chaperones and folding catalysts [BR:
sply03110
]
Heat shock proteins
HSP60 / Chaperonin
Q5A_001585 (groL)
Mitochondrial biogenesis [BR:
sply03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Q5A_001585 (groL)
Exosome [BR:
sply04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Q5A_001585 (groL)
Exosomal proteins of other body fluids (saliva and urine)
Q5A_001585 (groL)
Exosomal proteins of breast cancer cells
Q5A_001585 (groL)
Exosomal proteins of colorectal cancer cells
Q5A_001585 (groL)
Exosomal proteins of bladder cancer cells
Q5A_001585 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
ANS40819
LinkDB
All DBs
Position
348010..349656
Genome browser
AA seq
548 aa
AA seq
DB search
MAAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREI
ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQSIITEGLKAVAAGMNPMDLKRGI
DKAVIAAVEELKKLSVPCSDSKAIAQVGTISANSDETVGKLIAEAMEKVGKEGVITVEEG
TGLQDELDVVEGMQFDRGYLSPYFINKPETGSIELESPFILLADKKISNIREMLPVLEAV
AKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTV
ISEEIGLELEKTTLEDLGTAKRIVINKDTTIIIDGNGEEPAIQGRVSQIRQQIEEATSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALI
RAASKLSELRGVNEDQNVGIKVALRAMESPLRQIVLNCGEEPSVVANTVKAGEGNYGYNA
ATEEYGDMIAMGILDPTKVTRSALQYAASVAGLMITTECMVTDLPKSDAPDLGGAGGMGG
MGGMGGMM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagacgtaaaattcggcaatgacgctcgcgtgaaaatgctccgcggcgtg
aatgttctcgctgatgcagtaaaagtgaccctgggcccgaaaggccgtaacgtagtgctg
gataaatccttcggcgctcctaccatcactaaagatggcgtatccgttgcccgtgaaatc
gaactggaagacaagtttgaaaacatgggtgcgcagatggtgaaagaagtggcctccaaa
gcgaacgacgctgcgggcgacggcaccaccactgcaaccgtactggctcaatccatcatc
accgaaggcctgaaagcagttgccgccggcatgaacccgatggatctgaagcgcggtatc
gacaaggctgttatcgcagccgttgaagagcttaaaaaactgtccgtaccttgctctgac
tccaaagctatcgctcaggtaggcaccatctctgcaaactccgacgaaaccgtgggtaaa
ctgattgcagaagccatggagaaagtgggcaaagaaggcgttatcaccgttgaagaaggc
actggcctgcaagacgagctggacgttgttgaaggtatgcagttcgaccgcggttacctg
tctccttacttcatcaacaaaccggaaaccggttctatcgagctggaaagcccgttcatc
ctgctggctgacaagaaaatctctaacatccgtgaaatgctgccagtactggaagccgtg
gcgaaagccggcaagccattgctgatcattgctgaagatgttgaaggcgaagcactggct
accttggtggtcaacaccatgcgcggcatcgtgaaagtggctgcggttaaagcacctggt
ttcggcgaccgtcgtaaagccatgctgcaggatatcgctaccctgactggcggtaccgtt
atctctgaagagatcggtctggagctggaaaaaacgactctggaagacctgggtactgct
aaacgtatcgttatcaacaaagacaccactatcatcatcgatggcaatggtgaagaacct
gcgattcagggccgtgtgtcccagattcgtcagcagatcgaagaagcaacttctgattac
gaccgtgaaaaactgcaagagcgcgtagctaaactggctggcggcgttgcggtaatcaaa
gtcggtgctgctaccgaagttgaaatgaaagagaagaaagctcgcgttgaagatgccctg
cacgcaacccgtgctgcggtagaagaaggcgtagttgctggtggtggtgttgcgctgatt
cgcgcagcgtccaaactgagcgaactgcgtggcgtgaacgaagatcagaacgtgggtatc
aaagttgcgctgcgcgcaatggaatcaccactgcgtcagatcgttctgaactgcggcgaa
gagccatctgttgttgccaacaccgtgaaagcgggcgaaggtaactacggttacaacgca
gcaactgaagaatacggcgacatgatcgcgatgggtatcctggatccaaccaaagtaacc
cgttctgctctgcagtacgcggcttctgtggctggcctgatgatcaccaccgagtgcatg
gtgaccgacctgccgaaaagcgatgcgcctgatttaggcggcgctggcggtatgggcggc
atgggtggcatgggcggcatgatgtaa
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