Serratia inhibens: Q5A_002030
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Entry
Q5A_002030 CDS
T04576
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
sply
Serratia inhibens
Pathway
sply03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sply00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Q5A_002030 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sply03019
]
Q5A_002030 (pnp)
03016 Transfer RNA biogenesis [BR:
sply03016
]
Q5A_002030 (pnp)
Enzymes [BR:
sply01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Q5A_002030 (pnp)
Messenger RNA biogenesis [BR:
sply03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Q5A_002030 (pnp)
Transfer RNA biogenesis [BR:
sply03016
]
Prokaryotic type
tRNA degradation factors
Q5A_002030 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
S1_2
aRib
OB_RRP5_4th
S1_RRP5
KH_2
KH-I_KHDC4-BBP
KH_SLS1_2
UPF0181
Motif
Other DBs
NCBI-ProteinID:
ANS40903
LinkDB
All DBs
Position
434239..436362
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AA seq
707 aa
AA seq
DB search
MLTPIIRKFQYGQHTVTIETGMMARQATAAVMVSMDDTAVFVTVVGQKKAKPGQSFFPLT
VNYQERTYAAGRIPGSFFRREGRPSEGETLTSRLIDRPIRPLFPDSFLNEVQVIATVVSV
NPQVNPDIVAMIGASAALSLSGIPFNGPIGSARVGYINNQYVLNPTTDELKESSLDLVVA
GTAGAVLMVESEADVLSEDQMLGAVVFGHEQQQIVIENINSLVAEAGKPKWDWQAPAINE
ALHARVAELAESRLGDAYHITEKQERYAQVDAIKSSVVEALLAQDETLDASEIQDILGSV
EKNVVRSRVLRGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTAR
DAQNLDELMGEKTDSFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAMMPKPED
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEQDNFVVLSD
ILGDEDHLGDMDFKVAGSRDGITALQMDIKIEGITREIMQVALNQAKGARLHILGVMEQA
ISTPRGDISQFAPRIHTIRINPDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAAT
DGEKAKFAIRRIEEITAEIEVGRIYQGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLQMGQEVPVKVLEVDRQGRVRLSIKEATAPEADSSAPAPEAE
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
ttgctgacaccgatcattcgcaaattccagtatggccagcataccgtcaccatcgagacc
ggtatgatggctcgtcaggccaccgccgccgttatggtgagcatggatgacaccgcagta
ttcgttaccgtagttggccagaaaaaagccaagccaggccaaagcttcttcccgctgacc
gttaactatcaggagcgtacttacgctgctggtcgtatcccgggcagcttcttccgtcgt
gaaggccgtccgagcgaaggcgaaaccctgacctcgcgcctgattgaccgtccgatccgt
ccactgttcccggacagcttcctgaatgaagttcaggtgatcgcgaccgtagtttccgtt
aacccgcaggtaaacccggacatcgttgcgatgatcggcgcctctgctgccctgagcctg
tccggtattccgttcaacggcccaatcggctctgcacgcgtgggttacatcaacaatcag
tacgtgctgaacccaactaccgacgagctgaaagaaagcagcctggacttggtggttgcc
ggtaccgctggcgcagtgctgatggttgaatccgaagctgacgttctgagcgaagatcag
atgctgggcgcggtggtctttggccatgagcaacagcagattgttatcgaaaacatcaac
tccctggttgccgaagccggcaagcccaagtgggactggcaggcgcctgccatcaacgaa
gcgctgcacgcgcgcgttgcggaactggcggaaagccgtctgggcgacgcttatcacatc
accgagaaacaagagcgttacgcgcaggtagatgcgatcaagagcagcgtagttgaagcc
ctgctggcgcaggacgaaaccctggacgcgtctgaaattcaggacatcctgggcagcgtt
gagaaaaacgttgtacgtagccgcgtgctgcgtggcgagccgcgtatcgacggccgcgaa
aaagacatgatccgtggcctggacgtgcgcaccggcgtgctgccgcgtacccacggttcc
gcactcttcacccgtggcgagactcaggctctggttaccgcaacgctgggcaccgcccgt
gacgcgcagaatctggacgagctgatgggcgagaagaccgacagcttcctgttccactat
aacttccctccgtactccgtaggtgagaccggtatggtgggttcgcctaaacgtcgtgaa
attggtcacggtcgcctggcgaaacgcggtgtattggctatgatgcctaaaccggaagat
ttcccgtacacggtgcgtgtggtttctgaaatcaccgaatccaacggttcttcttcaatg
gcttctgtctgtggtgcctctttggcgctgatggacgcaggcgtgccaatcaaggcagcc
gttgcgggtatcgcaatgggcctggttaaagaacaagataactttgtcgttctgtccgac
attctgggtgacgaagatcacctgggcgacatggacttcaaagtagccggtagccgtgac
ggtattaccgcgctgcagatggacattaaaattgaaggcatcacccgcgaaatcatgcag
gtggcactgaaccaggccaagggcgcacgtctgcacatcctgggcgtaatggaacaggct
atcagcactccgcgtggcgatatctctcagttcgcaccacgtatccacacaatccgaatc
aacccggacaagatcaaagacgtgatcggtaaaggcggctcagtcatccgtgcgctgact
gaagagaccggcactaccatcgaaatcgaagatgatggtacggttaaaattgctgctacc
gacggtgagaaagccaagttcgctatccgtcgcatcgaagagatcaccgcagagatcgaa
gtgggccgtatttaccagggtaaagttacccgtatcgttgatttcggcgcattcgtggcg
atcggcggcggtaaagaaggtctggtgcacatctctcaaatcgctgacaagcgcgttgag
aaagtgaccgactatctgcagatgggtcaggaagtaccggttaaggtactggaagttgac
cgtcagggccgtgtgcgtctgagcatcaaagaagctacagcgccagaagcagactcgtct
gcacctgcgcctgaagcagaataa
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