Serratia inhibens: Q5A_002265
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Entry
Q5A_002265 CDS
T04576
Symbol
treR
Name
(GenBank) HTH-type transcriptional regulator TreR
KO
K03485
LacI family transcriptional regulator, trehalose operon repressor
Organism
sply
Serratia inhibens
Brite
KEGG Orthology (KO) [BR:
sply00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sply03000
]
Q5A_002265 (treR)
Transcription factors [BR:
sply03000
]
Prokaryotic type
Helix-turn-helix
LacI family
Q5A_002265 (treR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LacI
Peripla_BP_3
Peripla_BP_1
HTH_3
HTH_31
HTH_IclR
Peripla_BP_4
HTH_23
HTH_7
MarR_2
HTH_Tnp_ISL3
AAA_18
HTH_Crp_2
SpoIIID
MarR
HTH_AraC
HHH
Xre-like-HTH
CENP-B_N
TrmB
HTH_26
Motif
Other DBs
NCBI-ProteinID:
ANS40950
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All DBs
Position
complement(486014..486961)
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AA seq
315 aa
AA seq
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MQNRLTIKDIARLSGVGKSTVSRVLNNEGSVSPQTRERVEAVIRQQGFTPSKSARAMRGQ
SDKVVGIIVSRLDSPSENQAVRTMLPLLYQQGYDPIVMESQFETRLVEEHLHVLQQRNVD
GVILFGFTGLTAAMLSPWQEKMVVLAREYDGFSSVCYDDDGAVRLLMERLQQQGHRHISY
LGVQLADATTGLRRHQAYLDACRQQRITPSVALGELSYQSGFQLAAEVIGPQTTALVCAS
DTIALGAIKYLQQQHIAPLQVCGIGNTPLLNFLFPETFSVELGYGSAGLQAAQQLLGQLS
GEQGIRQIIVPSKLA
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaccggctgaccatcaaggacatcgcccgcctgagcggcgtggggaaatccacc
gtatcgcgcgtattgaacaacgaaggcagcgtgagcccgcaaacccgtgaacgggtagaa
gcggtgatccgtcagcaggggtttacgccgtccaaatcggcgcgcgccatgcgcgggcag
agcgacaaagtggtggggattatcgtttcccgcctcgattcgccgtcggaaaaccaggcg
gtgcgcaccatgctgccgctgctgtatcagcagggttacgacccgatcgtgatggaaagc
cagtttgaaacccgcctggtagaagagcatctgcacgtgctgcaacagcgcaacgtcgac
ggggtgatcctgttcggtttcaccggcctgacggcggccatgctcagcccctggcaggaa
aaaatggtggtgctggcgcgcgaatacgatgggttttcatcggtttgctacgacgacgat
ggcgcagtccggctgctgatggaacgcctgcaacagcagggccatcggcatatcagctat
ctgggggtgcaacttgccgatgccaccaccggcctgcgccgccatcaggcttatctcgac
gcctgccgccagcagcggatcaccccgagcgtcgccctgggcgaactgagttaccagagc
ggttttcaactggctgccgaggtgattggcccgcagaccaccgcgctggtgtgcgcctcc
gataccatcgccctcggcgccatcaaatacctgcaacagcagcacatcgccccgctgcaa
gtctgcggcatcggcaatacgccgctgcttaatttcctgttccccgagacgttttcggtc
gagctgggctacggcagcgccgggttgcaggccgcccaacagctgctgggccagctcagc
ggcgaacagggcatccgccaaatcatcgtgcccagcaaactcgcctga
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