Serratia inhibens: Q5A_004740
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Entry
Q5A_004740 CDS
T04576
Symbol
sbcC
Name
(GenBank) Nuclease SbcCD subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
sply
Serratia inhibens
Brite
KEGG Orthology (KO) [BR:
sply00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sply03400
]
Q5A_004740 (sbcC)
DNA repair and recombination proteins [BR:
sply03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Q5A_004740 (sbcC)
Archaeal homologous recombinant proteins
Q5A_004740 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
SMC_N
AAA_23
AAA_29
AAA_15
nSTAND3
ABC_tran
cobW
nSTAND_NTPase5
AAA_21
TsaE
NTPase_1
AAA_22
AAA_14
GTP_EFTU
Motif
Other DBs
NCBI-ProteinID:
ANS41431
LinkDB
All DBs
Position
complement(1016481..1019735)
Genome browser
AA seq
1084 aa
AA seq
DB search
MKILSLRLKNLNSLQGEWKIDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHQTPR
LNVTPSQNELMTRHTAESLAEVEFEVKGVGYRAFWSQRRAKNAPDGNLQAPKVELALRED
GKILADKVRDKLDLTAAITGLDFGRFTKSMMLSQGQFAAFLNADANDRAELLEELTGTEI
YGQLSERVFEQHKQAKADLDALHQRASGIELLNDEQRQQLESQLAELSAQEAALSGQARQ
QQQALNWLQQWQQTQHQQQEYQRQLSVVQQEQAAAEPQLQQLARSEPAEKLRPLHSDRHR
CRSDQQALQQQIAQLAQQQEHQLAQMAPLQQAMEKARAEQQAQAERQQTQQRLIDEQIVP
LDHQIAQWQKTQAELQQACDSAARQCHQQKADLEQLKVQRSQLTAQAGQHQEKLNGLSAA
LMTQQQQQNALEAQSPLAALRQRQTALAELRPVRQQLFTLSSLFRQTNERLEQQRKEFSA
RQAQLGEHEQQLEETRRHYKQQKAHQLDVEKALELEKRIVSLEAERALLQSGEPCPLCGS
ASHPAIEQYQAVKPSETALRLAEMRVKTEALYTLGTELRTRCESLKEQQQRQQQQITQDE
QQLAAQRQQWQTLSAPLAFDFELEDAERLGQWLNACDSEERQGQQWLTQHEQAAQAVQQA
KDALAELQAQQQQAQQQQALLDERFTLLEKNHADAQLQQQRLQQQWQEGEKTLGEHRAQR
LALFGEQQIPQVREQLRAQQAVCEQASLQAAEQWQKAQEQRDRLAGQLAGLQQQQQRQSE
RLQQAEQTWLEALAASEFSDEATFSAALLDDVQRRQLQQHKEQLHQRQVEASALLAQAAQ
TLERQRQQRPEGLDEALADAQALSQSLEALAQQLKALQLRQGEVRNQLESDAARRLNQQS
LFEQIGQSQQQYDDWSYLNQLIGSKEGDKFRKFAQGLTLDHLVYLANNQLGRLHGRYLLQ
RKTSDALELQVVDTWQADALRDTRTLSGGESFLVSLALALALSDLVSHKTSIDSLFLDEG
FGTLDAETLDTALDALDSLNASGKTIGVISHVEAMKERIPVQIKVKKVNGLGISRLEPQF
RLES
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctgagcctgcggctgaagaacctcaattcattgcagggcgagtggaagatc
gatttcaccgcagagccttttgccagcaatgggctgttcgccatcaccgggccgaccggc
gcgggcaaaaccacgctgctggatgccatttgtctggcgctctaccaccaaacgccgcgc
ctcaacgtgacgccgagccagaacgaactgatgacgcgccacaccgccgaatcgctggcg
gaagtcgaatttgaggtcaagggcgtcggttaccgcgccttctggagccaacgccgtgcc
aaaaacgcgccggacggcaacctgcaagcgccaaaggtggaactggcactgcgtgaagac
ggtaaaatcctggcggataaagtccgcgacaagctggatctgaccgccgcgatcaccggg
ctggatttcggccgcttcaccaaatcgatgatgctgtcccaggggcagttcgccgccttc
ctcaatgccgatgccaatgaccgggccgaactgctggaagagctgaccggcaccgagatc
tacggccagctttccgaacgggttttcgagcagcacaaacaggccaaagccgatctggac
gccttgcatcaacgcgccagcggcattgagctgctgaatgacgaacagcgtcagcagttg
gagagccagttagctgagctgagcgcgcaggaagccgccctcagcgggcaggcccggcaa
cagcaacaggcgctgaactggctgcaacagtggcagcaaacgcagcaccagcagcaggaa
taccaacgccagttgagcgtcgtgcaacaagaacaggctgcggccgaaccgcagttgcag
cagttggcgcgcagcgaaccggcggagaaactgcgaccgctgcatagcgatcgtcaccgc
tgccgcagcgaccaacaagcgctgcaacagcagatcgcccaactggcgcagcaacaggag
catcagcttgcgcagatggcgccattgcagcaggcaatggaaaaagcgcgcgccgagcaa
caggcgcaggccgaacgccagcagacccagcagcggctgatcgacgagcaaatcgtcccg
ctcgaccaccagattgcgcagtggcaaaaaacgcaggcggaattgcagcaggcgtgcgac
agcgccgcccgacagtgccatcagcagaaagcggatctggagcaactcaaggttcaacgc
agccaactgaccgcgcaagccgggcagcatcaggagaagcttaacggccttagcgcagcg
ctgatgacgcagcaacaacagcaaaatgcgctggaagcgcagtcgccgctggcggcgctg
cgtcagcgtcagaccgcgttggccgagctgcgcccggtgcgccagcagttgttcaccctc
tcctcgctgttccgccagaccaacgaacggctcgagcaacagcgtaaagagtttagcgcc
cgtcaggcacaacttggcgaacatgagcaacagctggaagaaacgcggcggcactacaag
cagcaaaaagcgcatcagttggacgtggaaaaagcccttgagttggaaaaacgcatcgtc
agcctggaagccgagcgcgcgctgctgcaaagcggcgagccctgcccgctgtgcggctcc
gccagccatccagccattgagcaatatcaggcggtaaaaccctccgagacggcattgcgc
ctggcggaaatgcgcgtcaaaaccgaggcgctgtacaccttgggcaccgaactgcgcacc
cgttgcgaaagcctgaaggaacaacaacagcgccaacagcagcagataacgcaggacgaa
caacaacttgccgcccagcgccaacagtggcaaaccctcagcgcaccgctggcgtttgat
ttcgaactggaagatgccgagcgcctgggccagtggctgaacgcctgcgacagcgaagaa
cgccagggccagcaatggctgacgcagcacgaacaggcggcacaggcggtgcagcaggcg
aaagatgccctggctgaactgcaggcacagcaacaacaggcgcaacagcaacaagcgttg
ctggacgaacgcttcaccctgctggaaaaaaaccacgccgatgcacagttgcaacagcaa
cgcctgcagcaacagtggcaagagggcgagaaaaccctgggcgaacaccgcgcgcagcgg
ctggcgctgtttggcgaacaacagattccgcaggtgcgtgaacagttgcgtgcccaacag
gccgtctgcgagcaggccagccttcaggcggcggaacaatggcagaaagctcaggagcag
cgcgatcgcctggccggccagcttgccggcttgcaacagcagcaacaacggcagagcgaa
cggttgcaacaggcggaacaaacctggctggaagcactggccgccagcgaattcagcgac
gaagccactttcagcgccgcgctgttggacgacgtacaacgccggcaattgcagcagcat
aaagaacagctgcaccagcggcaggtggaggccagcgccctgctggcacaggcagcccag
acgctggagcggcagcgacagcagcgcccggaggggctggatgaagccctggccgacgcg
caagccctgagccagagcctggaggcgcttgcgcagcagttgaaagccttgcaactgcgc
cagggcgaagtgcgcaaccaattggaaagcgacgccgcacgccgtctcaatcagcaatcg
ctgtttgaacaaatcggccaaagccagcagcagtacgatgactggagctacctcaatcaa
ctgatcggctccaaagagggcgataaattccgtaagtttgcccaggggctgacgctggat
catctggtgtatctggccaataaccagcttgggcggctgcatgggcgttacctgttgcaa
cgcaaaaccagcgacgcgctggaactgcaggtggtggatacctggcaggcggacgcgctg
cgtgatacccgcaccctgtccggcggcgaaagtttcctggtcagcctggcattggcgctg
gcgttgtctgacctggtcagccacaaaaccagcatcgactcgctgttcctcgacgaaggc
ttcggcacgctggatgcggaaaccctggataccgcgctggacgcgctcgacagcctgaat
gcttccggtaaaaccatcggcgtgatcagccatgtcgaagcgatgaaagaacgcattccg
gtgcagattaaggtgaaaaaggtcaacggactgggtatcagccggctggagccgcagttt
cggctggaaagttag
DBGET
integrated database retrieval system
