Serratia inhibens: Q5A_006290
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Entry
Q5A_006290 CDS
T04576
Symbol
phrB
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
sply
Serratia inhibens
Brite
KEGG Orthology (KO) [BR:
sply00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sply03400
]
Q5A_006290 (phrB)
Enzymes [BR:
sply01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
Q5A_006290 (phrB)
DNA repair and recombination proteins [BR:
sply03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
Q5A_006290 (phrB)
Prokaryotic type
Q5A_006290 (phrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ANS41734
LinkDB
All DBs
Position
1336415..1337845
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AA seq
476 aa
AA seq
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MATHLVWLRNDLRITDNKALHAACCDPTARVLAVFIATPGQWRQHQMAPRQAAFIHANLL
QVQQALADRGIPLVCHQCDDFAAAIDWLVAYCAQERVDALFYNRQHEINELRRDRQAERR
LSGQVICQSFDDSLLLPPGSVQTGGGEMYKIYTPFRKAFIQRLSEFDVRSLPAPKPREGG
ALPVSAAPAAFDYPSAGVGADFPAGEEAALQRLRVFCREQVQDYLQQRDFPAIAGTSSLS
PYLAIGVLSPRQCFNRLRAECPQVLENSDSGAFGWLNELIWREFYRHLMVAYPALCRHRP
FIEWTDKVRWRDNDALLLAWQQGATGYPIVDAAMRQLNKTGWMHNRLRMISASFLVKDLL
IDWRAGERYFMSQLLDGDLAANNGGWQWAASTGTDAAPYFRIFNPTTQGERFDPQGTFIR
KWLPELADVPDNDLHQPYRWAEKQQRTLDYPLPIVDHKQARLETLAAFEAARRGEY
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggccactcatctggtctggttacgtaacgatctgcgtataaccgataacaaagcgctg
cacgccgcctgttgcgatcccactgcccgcgtgctggcggtgtttatcgctactcctggg
cagtggcggcagcatcagatggcaccgcgtcaggcggcgtttatccatgccaacctgctg
caggttcaacaggcgctggcggatcgcggtattccgctggtctgccatcagtgtgatgat
tttgccgctgcgattgactggctggtggcatattgcgcgcaagagcgggtggatgcgctg
ttttataaccgccagcacgagattaatgagctaaggcgcgaccgacaggcagagcggcgt
ttatccgggcaggtgatttgccaaagcttcgatgacagcctgctgttaccgccgggcagc
gtacaaaccggcggcggggagatgtacaagatttatacgccgtttcgcaaggcgtttatc
cagcggctgagcgaattcgacgttcgttccctgccggcacccaaacctcgtgaaggcggc
gcattgccggtgtcagctgcgccggcggcattcgattacccgtcggccggggtgggcgca
gattttcccgccggggaagaggcggcgctgcaacggctgcgcgttttctgccgtgaacag
gtgcaagattacctgcaacaacgtgattttccggctattgccggcaccagcagcctgtcg
ccgtatctggcgattggcgtactgtcgccgcgccagtgttttaaccgcctgcgtgccgaa
tgcccgcaggtgctggaaaacagcgacagcggagcctttggctggctgaacgaactgatc
tggcgcgaattttatcggcatctgatggtggcttatcctgcgttatgcaggcaccgtccc
tttatcgagtggacggataaggtacgctggcgggataacgacgcactgttgctggcctgg
cagcaaggtgcgaccggctatccgatcgtcgatgccgccatgcgtcagttgaataaaacc
ggctggatgcacaacaggttacgcatgatcagcgccagctttttggtgaaggacctgctg
atcgactggcgcgccggcgaacgttatttcatgtcgcaactgttggacggcgatctggcg
gcgaataacggtggctggcagtgggcggcttcaaccggtaccgacgccgcgccgtatttc
cgcatctttaacccgaccacccagggcgaacgttttgatccgcaaggcacttttatccgt
aaatggttgcccgagctggcggatgtaccggacaatgatctccatcaaccctatcgctgg
gcggaaaaacagcaacgcacgctggattacccgctgccgattgtcgatcacaagcaggcc
cggctggagacgctggcggcctttgaagcggccaggcggggggaatattaa
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