Serratia inhibens: Q5A_006690
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Entry
Q5A_006690 CDS
T04576
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
sply
Serratia inhibens
Pathway
sply03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sply00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Q5A_006690 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sply03019
]
Q5A_006690 (rhlE)
Enzymes [BR:
sply01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Q5A_006690 (rhlE)
Messenger RNA biogenesis [BR:
sply03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Q5A_006690 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
HI1480
AAA_22
UvrD-helicase
Shikimate_DH
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
ANS41807
LinkDB
All DBs
Position
1415303..1416661
Genome browser
AA seq
452 aa
AA seq
DB search
MSFETLGLSAEILRAVEEQGYREPTPIQRQAIPVVLEGRDLMASAQTGTGKTAGFTLPLL
QLLSKHDHPIKGRRPVRALILTPTRELAAQIGENVEAYSKHLRLRSLVVFGGVSINPQMM
KLRGGVDILVATPGRLLDLEHQNAVDLSKIEILVLDEADRMLDMGFIHDIRRVLAKLPAK
RQNLLFSATFSDDIKALANKLLHNPASVEVARRNTASEQIEQSVHFVDKKRKRELLSQMI
GEGDWKQVLVFNRTKHGANHLAEQLNKDGITAAAIHGNKSQGARTRALADFKDGKIRVLV
ATDIAARGLDIDQLPHVVNYELPNVPEDYVHRIGRTGRAERTGEAISLVCVDEHKLLRDI
ERLLKREIPRIALPGYEPDPSIKAEPIINGRQGGGRGNGGGQRSGGGQRSGNGGGHSGQR
ENRGGGSARPQGDGKPRSGAPARRPRSRKPGE
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttgaaactctcggcttaagtgctgaaattctgcgcgctgttgaagaacagggc
tatcgcgaacctacgccaattcagcgccaggctatccctgttgtattggaaggtcgtgac
ctgatggccagcgcacagaccggtaccggtaaaaccgctggctttaccctgccgctgttg
cagctgctgagtaagcatgatcatccgatcaaaggccgtcgcccggtacgtgcgctgatc
ctgacgccaacccgtgaactggcggcgcagatcggcgaaaacgtcgaagcttacagcaaa
cacctgcgcctgcgttcgctggtggtgtttggcggcgtgagcatcaacccgcagatgatg
aaactgcgcggcggcgtcgacattctggtggcaacaccgggtcgcctgctggatctggaa
caccagaacgcggttgatctgtccaaaattgaaattctggtgctggacgaagctgaccgc
atgctggatatgggctttatccatgatatccgccgcgtgctggccaagctgcctgccaag
cgtcagaacctgctgttctcggccaccttctccgacgacatcaaagcgttggcgaacaag
ctgctgcacaacccggcatcggtggaagtggcgcgccgcaataccgcgtccgagcagatc
gaacaaagcgtgcacttcgtcgacaagaagcgtaagcgggaactgctgtcgcagatgatc
ggcgaaggcgactggaagcaagtattggtgttcaaccgcaccaagcacggcgccaaccac
ctggccgagcagctgaacaaagacggcatcaccgccgcggcgatccacggcaataaaagc
cagggcgcgcgtacccgtgcattggccgattttaaagacggcaaaattcgcgtgctggtg
gcaaccgacatcgcggcgcgtggtctggatatcgaccaactgccgcacgtggtgaactac
gagctgcctaacgtgccggaagattacgtgcaccgcatcggccgtaccggccgtgcagag
cgtaccggtgaggctatctcgctggtttgcgtggatgaacacaaactgctgcgcgacatc
gagcgcctgctgaagcgtgaaatcccgcgtattgccctgccaggctacgagccggaccca
agcatcaaggcggagccgatcatcaacggccgtcagggtggcgggcgcggcaacggcggc
ggtcaacgctccggtggcggccagcgcagcggtaacggcggcggccatagcggccaacgt
gaaaaccgtggcggcggcagtgcccgtcctcagggcgatggcaaaccgcgttcaggcgcg
ccggcacgccgtccgcgcagtcgcaaaccgggcgaataa
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