Serratia inhibens: Q5A_007420
Help
Entry
Q5A_007420 CDS
T04576
Symbol
rcdA
Name
(GenBank) HTH-type transcriptional regulator RcdA
KO
K16138
TetR/AcrR family transcriptional regulator, repressor for uid operon
Organism
sply
Serratia inhibens
Brite
KEGG Orthology (KO) [BR:
sply00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sply03000
]
Q5A_007420 (rcdA)
Transcription factors [BR:
sply03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
Q5A_007420 (rcdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TetR_N
TetR_C_11
TetR_C_6
TetR_C_7
TetR_C_36
TetR_C_43
TetR_C_13
TetR_C_29
MamY_C
TetR_C_37
TetR
TetR_C_31
TetR_C_26
LacI
TetR_C_41
Motif
Other DBs
NCBI-ProteinID:
ANS41953
LinkDB
All DBs
Position
1555943..1556506
Genome browser
AA seq
187 aa
AA seq
DB search
MGNREKIVDAALYSFTHKGFHQTSMRDIARVAGVSVGNLYNHFAGKEALIGEIAFMESRF
FTELATQLMAEKDRPRQALSAFFTAYYAFVASPDNVQLSAEIVAEVARNPALAKTFSANQ
QQLTDALEQVITLAQQSEVIEPALNPRELAQLILDAIESQAWRQTIFPSGTPTAVTPNPL
LEQLIFR
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaccgtgaaaaaatcgttgatgccgcgttgtacagctttacccacaaagggttc
caccagaccagcatgcgggatattgcgcgggtggcaggggttagcgtgggcaatctctac
aatcactttgccggaaaggaagcgttgatcggcgaaattgcgtttatggagagccgcttt
tttaccgagttggctacccaattgatggccgaaaaggatcggccgaggcaggcgttatcc
gctttttttaccgcctattatgcttttgttgcttcaccggacaacgtgcaactgtcggcg
gaaatcgtggcggaagtggcacgaaaccctgccctggccaagacattcagcgccaatcag
cagcaactgacggatgcgctggagcaggtcattactctggcgcaacaaagcgaagtgata
gagccggcattaaatcctcgcgaacttgcccaactcatccttgacgctatcgaaagccag
gcctggcgtcagacgatttttccatccggcacaccgacggcggtcacgccaaacccactg
ctggagcagttgatcttccgataa
DBGET
integrated database retrieval system
