Serratia inhibens: Q5A_008575
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Entry
Q5A_008575 CDS
T04576
Name
(GenBank) hypothetical protein
KO
K21470
L,D-transpeptidase YcbB
Organism
sply
Serratia inhibens
Brite
KEGG Orthology (KO) [BR:
sply00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sply01002
]
Q5A_008575
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sply01011
]
Q5A_008575
Peptidases and inhibitors [BR:
sply01002
]
Cysteine peptidases
Family C82
Q5A_008575
Peptidoglycan biosynthesis and degradation proteins [BR:
sply01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
Q5A_008575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
ANS42183
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All DBs
Position
1826746..1828587
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AA seq
613 aa
AA seq
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MLLKNGNTLRRLALSCAIASGLASSLPAWATVPAFPVASSGMSVAQSRSELLAALPKGIT
PHYLSTLAPLYAANRMQLMWQDREAVQQFQQQLAELAMSGVQPQFTQWVKMLTDPAITGV
ARDVVLSDAMLGYLQFVSAIGANGNSWLYSNIPYKLGLPPNAVINQWQLAVRQGKTLAYV
TTLAPQHPQYAKMHQALRDMLADNRPWPQMANGPSLRPDQLSSDIAALREILARNGMLTT
TAAPVQTQDPPAVLTGSRNEPDDGGLSVDEEKNRESKSVVISPSAAPVKDLAASPESPFA
QQPAGPVTVTDNAYTPDLVEGVKRFQKWQGLSADGVIGVRTREWLNVSPQTRASLLALNI
QRLRILPGYVDTGIMVNIPNYSLTYYQNGNEVLSSRVIVGRPSRKTPLMSSALNNVVVNP
PWNVPTTLVREDIVPKAMRDGSYFQKHGYTVLSGWSNDAEVINPAMIDWNMVSARNFPYR
IRQAPGATNSLGRFKFNMPSSDAIYLHDTPNHNLFQKDIRALSSGCVRVNKASDLANMLL
QDAGWNNTRVSSTLKGGNTTYVNIRQHIPVKLYYLTAWVSDDGKPQFRTDIYNYDDTVRS
GAQILAQAEKLMQ
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgttgcttaaaaatggaaacactttacggcgtctggcgctgagctgcgcaatcgcatct
ggacttgcgtcgtcgttacccgcatgggcaaccgtgcctgcgtttccggtggcgtcatcc
ggcatgtcagttgcgcaaagccgttcggaattgttggcagcattgccgaaagggattaca
ccgcactatctttcaacgctggctcctttgtacgccgcgaaccgaatgcaattgatgtgg
caggatcgcgaggcggttcagcagttccagcagcagttggctgaactggccatgtccggc
gtgcagccgcagtttacccaatgggtgaagatgctgaccgatccggcgattaccggcgtg
gcacgcgacgttgtcctgtctgatgccatgctggggtatttgcagttcgtttcagccatc
ggcgccaacggtaacagctggctgtatagcaatattccctacaagctcggtctgccgcct
aatgcggtgattaatcaatggcaactggcggtgcgtcagggcaagacgttggcttatgtc
accacgctggcaccgcagcacccgcaatatgccaagatgcatcaggcgctgcgcgatatg
ctggccgacaatcgtccgtggccgcagatggctaacggcccgagcttgcgccccgatcaa
ctgagcagcgacattgccgccctgcgtgagatcctggcgcgtaatggcatgctgaccact
accgcagcaccggtgcaaacgcaggatccgcctgcggtactgaccggctcgcgcaatgaa
ccggacgatggtggcttgtcggtagatgaagaaaaaaaccgcgagagcaaaagtgtggtt
atcagcccgtctgccgcaccggtaaaagatcttgccgcatcgccggaatcgccattcgcc
cagcagcctgccggcccggtgaccgtcactgataacgcctatacccccgatctggttgaa
ggcgttaaacgcttccagaaatggcaaggtttgagcgctgacggggtgatcggcgtgcgt
acccgcgaatggctcaatgtgtcgccgcaaacgcgcgcttcgctgctggcattgaatatc
cagcgtttgcgcatcctcccaggctacgtcgacaccgggatcatggttaacattcccaat
tactcgctgacttactaccagaacggcaatgaagtgctttcctcaagggtcatcgtcggt
cggcctagccgcaagacgccgctgatgagcagtgcgctgaacaacgtagtggtcaacccg
ccgtggaatgtgccgactacgctggtacgcgaagatattgtgccaaaggcaatgcgtgac
ggcagctatttccagaaacatggctataccgtgctttccggctggagcaatgacgccgag
gtgattaacccggcgatgattgactggaacatggtgtctgcgcgtaatttcccttaccgc
attcgccaggcgccaggcgccaccaactcactggggcgcttcaaattcaacatgccgagc
tcggatgctatctatctgcacgatacgccgaaccataatctgttccagaaagatattcgt
gccctgagttccggttgcgttcgcgttaacaaggcatctgatttggcgaatatgctgctg
caagatgccggctggaacaatacccgcgtttcctccacccttaaagggggaaataccacc
tacgtaaatatccgacagcatattccggttaaattgtattatttaaccgcctgggtttct
gatgatggaaagccacaatttcgtacagatatttacaattacgatgatacggtgagatcg
ggtgcacaaattttggctcaggccgaaaaattaatgcaataa
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