Serratia inhibens: Q5A_012675
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Entry
Q5A_012675 CDS
T04576
Symbol
wapA_3
Name
(GenBank) tRNA(Glu)-specific nuclease WapA
Organism
sply
Serratia inhibens
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
Motif
Other DBs
NCBI-ProteinID:
ANS42988
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All DBs
Position
2674184..2679262
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AA seq
1692 aa
AA seq
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MGNKNNLDVKVLENQAANLKGKANLLTASSSEPGYSNAPTYSSLGYEVDPRTGTLQVTLS
PPTFFGALGSNITPSIVYSPQSIASGITLLGLPLGWSYSFSYIAASQVFINGSSAYYIDD
VYESGLRYYNLKDLVFTSDSGTFPYDNQLKYSNTLQFISGETQYFDAHGRLLGVVDRWGN
HAIFYYTQEGDVYSSKLSSIVGFAGQRITFAYSGEGIEIAYPQGGQNAISFTYLVDNQSY
LVGYVNPLGQKFTIANRGGLVRNDLISQITYPNSASVVYEYTTLRYYVDANRSQFYRIDG
IAATRQIYVDTTGQTQTRSVSYSYDPNGDAHDYTGYPTYVMGKYQDTLLQSNDDDYRYVS
QVDDGVLVVEHQYNRLHLELATKTFTKDAQPRLIQQVTNTFISETDGKYFPPYYELKLIP
NYQTPIKVMTEIYNDAGERLISEIESDFDDYGAPTEVRSYGIRVSGEAPKLLNKVQTLYD
YAGYGQLVQQDTYDYTDGTIVRRIANSLTDDKKNIATSTDGFVVSAFSPNKKITYRYNAA
GKVIYEKLEWADGASHALESTETSTRYALAVPVLTITSINAQGIPNTTEIDTVTGWMISQ
ANALSYGSSYTYDNIGRQLTSIDPMGVVTEYIFDDSVNKATTRYANGFETYVYNNGFTDR
VKTADNGGYDKAERTLTANGYNDKGQLIWTEGILGTDSRILYAYDSRNQLVTATDASGNV
NRYEYDAVAQTKTEFFNDVLVSRLSKNDNVLDEVTYSSLLSSERVSATSLSNSYSNIIKS
LTGEPSAGKEWLAASFQYDVNNQVSSYSATGSDDIVQRQDISRDLFTNAVFTGVHVSAPE
TQESTAGGDTYFYDNLNQLLTDTNALGQQYTYVYNEIGLVSSYTDYVGTVFACDYNANNQ
LVSVAWTDQGAQCKKQYIYDPLTHKVRQIEEFRQGESKGSIAYDYGLGGAIKSVTYPDGK
KILYEYDLGTGLLSKFTDAIGKVTQYTYDNYGRITRQQIVGEDYSVQTDYYSKEESAANS
GKLKSIRVSNGISSRFSYDGFGSLAQAVITDTSEGATSPVLLETQYSYDPITRNLVKLQS
SSGAFAQDANLNYLANYSFDSRNQLTEERKQILGGDVAVTAYRYDAACNVIREDRRVGTT
SQSTTYTYDQDNKLLRIDASSGARNFAYDANGNLTDDGAGGTYRYNAQNRLIGYSDAGGN
LIAEYDYYPDGLRASKKVNDGAAIGFYYDYSSSPNIVNEIQGDKTSHYLAQGSKRYVRLV
DSAGITVAEYFIASFRDVVGVVDASCEMDASYAYEPYGQEEGASHLDADISVNPFRYTAE
YTDLESSLIYLRARYYHPGIKRFMGRDTTDLINRYNYANGNPIMGSDPSGNLGIGWVIGA
AIAGIAVGLITGGVGALALGTGMGAAITVGAVAGVAGTAASNGITEWGLHASGEPGLSAK
DWGVSLLAGAVSGVVGAGVGGVVGRGAMSTAMNAGWSAGRVTAVGVLSASASGGFSGSVT
SAGVTAGFDHQAFFSAEVWENIGISAAVGIGAGVMASGAHFGFGKIGGIRTTPVEMSASE
FSIITDRTTPNTILEFNPREASQWQGSNLGAMTGGQDTVIVHGHPRFSFPEDVQGRYRYA
SAKTTAQAIQNNIGGGGTVRLISCSAGKWIGVENMAQTIANTLSRPVEAYTVDVSIAEVV
NGTVTPVTYQPV
NT seq
5079 nt
NT seq
+upstream
nt +downstream
nt
atgggaaacaaaaataatcttgatgtcaaagtgctcgagaatcaggcggccaacctgaaa
gggaaagcgaacttgctcactgcgtcgtcaagcgaacccggatattccaatgcaccgact
tacagttcccttggctatgaggtcgatccgcgtacagggacgctgcaggttaccctttcg
ccgccgactttctttggcgccctgggcagcaacatcacgccatccatcgtttatagcccg
caatcgatcgcctcggggatcacgcttcttgggcttcccttgggctggagctattcattc
agttatatcgcggcgagccaggtattcatcaatggttcgtccgcttactacatcgacgat
gtgtatgagtcgggtttgcgctactacaacctgaaggatctcgtcttcaccagcgattcg
gggaccttcccttacgataatcagctaaagtacagcaatacattgcaatttatcagcggc
gaaacgcagtatttcgacgctcacggcagattgcttggcgtggtggaccgctggggcaac
catgccattttttattacacgcaagagggcgatgtctatagcagcaagttgtccagcatc
gtcgggttcgccgggcagaggatcaccttcgcttatagcggagagggcatcgagatcgct
tatccccagggagggcagaacgctatctccttcacctatctggtggataaccaaagctat
ttggtgggttatgtcaatccgcttgggcaaaagttcaccatcgccaatcggggtgggttg
gtcaggaacgatttgatttctcagatcacttatccgaacagcgcctcggtcgtctatgaa
tacaccactctgcgttattacgtcgatgcgaaccggtcgcagttttatcgcatcgatggc
atcgccgcgacaaggcagatctatgtcgataccaccggacaaacccagacaaggtcggtt
tcctattcctatgatcccaacggcgatgcccacgactatacggggtatccgacgtacgtc
atggggaaatatcaagataccctgctgcaaagcaatgatgacgattaccgttatgtgagc
caggtcgacgatggcgtgctcgttgtggagcatcaatacaatcggctccatctcgagctg
gcgacgaagacctttaccaaggatgctcagccccggcttattcagcaggtcaccaatacg
ttcatcagcgaaaccgacgggaaatattttccgccgtactacgaattaaaactgataccg
aattatcagacccccatcaaggtgatgaccgagatctacaacgacgcgggggaaaggttg
atcagcgagatagaatcggacttcgacgactacggcgcgccgacggaagtccgctcttat
ggcatcagagtgtcgggcgaggcgcccaaactgctcaacaaggtacaaactctttacgac
tatgccggctatgggcagcttgtccagcaggatacttatgactatacggatgggaccatc
gtcagaagaatcgccaatagcctgaccgacgacaagaagaatatcgccacgagcacagac
ggctttgtcgtctccgcctttagccctaacaagaagattacttatcgctacaacgccgcg
ggcaaggttatttacgaaaagctggaatgggccgatggcgcaagccatgcgctggagagt
acggagacctcgacccgttacgcccttgccgttcccgtgttgacgatcaccagcatcaat
gcgcaaggcataccgaatacgactgaaatcgatacggtgacgggatggatgatcagccag
gctaatgccctgagttatggttccagctatacgtatgacaatatcggccgccaactgacc
tcgatcgatcccatgggtgtagtgacggagtacattttcgacgattccgtcaacaaggcc
acgacccgatatgccaacggattcgagacctatgtctataacaatgggtttacggacagg
gtcaaaaccgccgacaacggcggctatgacaaggcggagcgtacgctcaccgccaatggg
tacaacgacaagggccaattgatctggaccgaaggcatcctgggcaccgattcgcggatc
ttgtacgcctatgacagcagaaatcagttggtcacggcgacggatgcgtcaggcaatgtc
aatcgctacgaatatgacgccgtggctcaaaccaagacggaattctttaacgacgtcttg
gtgagcaggttgagcaagaatgacaatgtgctcgacgaagtcacttactccagcctgctt
tcttccgagagggtgtcggcgacgagcctctccaacagctattcgaacatcatcaagtca
ctgacgggggagccatcggcagggaaggaatggctggcagcctccttccaatacgatgtc
aataaccaggtcagttcctacagcgcgacaggcagtgacgacatcgtacaacgccaggat
atttccagggatttatttaccaatgcggtattcaccggtgtccatgtcagcgcgcctgaa
acgcaagagtccaccgccggcggcgatacctatttttacgataacttgaatcagttgctc
accgacaccaatgcgctcggccagcaatacacctatgtctataacgagatcggcctggta
tccagttacacggattatgtaggaacggtgttcgcatgcgactacaacgccaataaccag
ttggtatcggttgcatggactgaccagggggcgcagtgcaagaagcaatatatctatgat
cccttgacgcataaggtgcggcaaatagaagagttccgccagggggagagcaaagggagt
attgcgtatgactatggtttgggcggtgcgattaaatcggtgacctatcccgacgggaaa
aagatcctttatgaatatgacctcggcacgggactgctcagcaaattcaccgatgccatc
gggaaggtcacgcaatatacgtacgacaattacggccggataactcggcaacagatcgtc
ggagaggattacagcgtccagaccgactattacagcaaagaggagagcgccgccaacagc
ggcaaactcaagtcgatccgggtcagcaacggcatctcgagccgtttctcctatgatggt
ttcggttcccttgcgcaggcggtcatcaccgatacgtccgagggtgcgaccagccctgtt
ttgctggagacgcaatattcctatgatccgatcacccgtaacctggtcaagctgcaatcc
agctcgggcgcatttgcgcaagatgccaatttgaattatctggcgaactacagtttcgac
agccgcaaccagctcacggaagagcggaaacaaatcctgggcggcgacgttgccgtcacg
gcgtatcggtatgatgcggcctgcaacgtcatccgggaagatcgcagggtcggaacgacc
agccagtcgacaacctatacctacgatcaggacaacaagttattgcgcatcgacgcctcg
tccggcgcaagaaacttcgcctacgacgccaatggcaatttgaccgacgatggggcgggc
ggcacatatcgctacaacgcgcaaaacaggctgatcggatatagcgatgccggcggcaat
ctgatcgccgaatacgattactaccccgatgggctgcgggccagtaaaaaggtcaatgat
ggtgcggcgatagggttttattacgactattcctcatcccccaatatcgtcaatgagata
cagggagataaaaccagccactacctggcgcagggcagcaagagatacgttcgcctggtc
gacagcgcagggatcaccgtcgccgaatatttcatcgcatccttccgggacgtcgtcggc
gtcgtcgatgcttcctgcgagatggatgccagctacgcttacgaaccctatgggcaagaa
gagggtgccagtcatcttgatgccgatatcagcgtaaatccattcagatataccgccgaa
tataccgacctcgagtcttccctgatctatctgagggcgcgttactaccatcccggaatc
aagcgcttcatgggccgggataccaccgaccttatcaaccgctacaactatgcaaatggc
aatcccatcatgggcagcgatcccagtgggaatttgggcataggatgggtgatcggtgcg
gctatcgcgggcatcgccgtgggccttattacggggggggtgggcgcattggccctgggt
acgggcatgggcgccgccatcactgtcggcgcggtggcgggcgtggccggcaccgcggcc
agtaatggcatcacggaatggggtctccatgcgagcggcgaacctggattgagcgccaaa
gactggggcgtcagcctgttggcgggagcggtgtccggcgtagtcggagccggcgtcggc
ggtgtggtcggtcgtggagcgatgagcaccgcgatgaatgcgggctggtctgccgggaga
gtcacggctgtcggtgtcctgtcggcttcagcgtccggcggtttctccggctcggtgacc
tccgccggcgtcactgccggcttcgatcatcaggcattcttcagtgctgaagtgtgggaa
aacatcggcatcagcgccgcggttggcataggagccggcgtgatggcatcgggcgcgcat
tttggtttcgggaaaatcggcggcatccgtactacacccgttgagatgagtgcctcggag
ttcagcatcattacggacaggaccacacctaataccattcttgagttcaaccctcgggaa
gcctctcaatggcaaggcagcaatctgggggcgatgaccggggggcaggatactgtgatt
gtgcatgggcatccgcgattctccttccctgaggatgtgcaaggcaggtatcggtatgcc
tccgccaagaccacggcccaggcgatacagaataatatcggcggcgggggcaccgtaagg
ctgatttcttgttccgcaggaaaatggataggcgtggaaaacatggcgcaaaccattgcc
aatacgctcagtcggccggtagaggcctataccgtcgacgtcagcattgctgaggtggtc
aatggcacagtgacgcctgtcacttatcagcctgtgtag
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