Serratia inhibens: Q5A_013785
Help
Entry
Q5A_013785 CDS
T04576
Symbol
dacD
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase DacD
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
sply
Serratia inhibens
Pathway
sply00550
Peptidoglycan biosynthesis
sply01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sply00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Q5A_013785 (dacD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sply01002
]
Q5A_013785 (dacD)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sply01011
]
Q5A_013785 (dacD)
Enzymes [BR:
sply01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Q5A_013785 (dacD)
Peptidases and inhibitors [BR:
sply01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
Q5A_013785 (dacD)
Peptidoglycan biosynthesis and degradation proteins [BR:
sply01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
Q5A_013785 (dacD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Beta-lactamase
Peptidase_S13
Motif
Other DBs
NCBI-ProteinID:
ANS43210
LinkDB
All DBs
Position
complement(2920602..2921771)
Genome browser
AA seq
389 aa
AA seq
DB search
MKRSVLSVITGIWLPLAVQAADTPLSFPLNTPPAIDAASYVLMDYTTGQVLAENNADERR
NPASLTKLMTGLVIDHALDQHKIGLDDVVTVGKDAWAQGNPVFKGSSLMFLKPGDRVTVR
DLSRGIIIDSGNDACVAMADYVAGSQAAFVKLMNEKSVQLGLQNTHFETVHGLDAPGQFT
TAGDLALISRAIIMSEPAEYHMYSEKSLSWNGITQQNRNGLLWDKNLRVDGLKTGHTESA
GFNIIASATEGDRRLIAVVMGGKSAKGREDQARKLLTWGLRDFATVHLFSAGQTLGQEKV
WYGDRHLVPVGSEQDQYLSLPKREADKLKAQYVITPSRLDAPLTKGQPIGEIRISDNGNL
LKTLPLVALQPVNNGGMFSRLMDYVKLKL
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
gtgaagcgttcagtattgtctgtgataaccggaatttggctgccgttggcggtacaggcg
gcggatacgccactcagttttcctctcaatacaccgccggcgatagacgcggcttcttac
gtattgatggattacaccaccggtcaggtactggcggagaacaatgcggacgagcggcgc
aatccggccagcctgaccaaactgatgaccggattggtgattgatcatgcgctcgatcag
cacaaaattggcctggatgacgtggtgaccgtgggcaaagacgcctgggcgcagggcaat
ccggtgttcaagggatcctcgctgatgttcctgaaacccggtgacagggtcacggtgcgt
gatctcagtcgcggcattattattgactccggcaacgatgcctgcgtggcgatggcggac
tacgtggcgggcagccaggccgcgttcgtcaaactgatgaatgaaaaaagcgttcagctt
ggcctgcaaaatacccattttgaaaccgtccacgggctggacgcgccaggccagttcact
acggccggcgatctggcgttgatttcgcgtgccatcatcatgagcgaaccggcggaatat
catatgtacagcgaaaaatcgctgtcctggaacgggattacccaacagaaccgcaatggg
ctgctgtgggataaaaacctgcgggtagacggcctgaaaacgggccataccgaatcggcc
ggttttaacattattgcctccgcgaccgaaggcgaccggcgtttgattgctgtcgtgatg
ggcggtaaaagcgccaaagggcgagaagatcaggcccgtaaactgctgacctggggtctg
cgagatttcgccaccgtgcatctgtttagcgcagggcaaactctggggcaggaaaaagtg
tggtatggcgatcgccatctggtgccggtgggcagcgagcaggatcaatacctcagcttg
ccaaagcgcgaggcggacaagttgaaagcccagtatgtgataaccccttcgcgtcttgac
gccccgctgacaaagggacagccgattggggagatccgcatcagcgataacggcaatcta
ttgaaaaccctgccgctggtggcgctgcagccggtaaacaacggcggtatgttctcgcgc
ctgatggactatgtgaagctgaaactctga
DBGET
integrated database retrieval system
