Serratia inhibens: Q5A_014170
Help
Entry
Q5A_014170 CDS
T04576
Symbol
xthA
Name
(GenBank) Exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
sply
Serratia inhibens
Pathway
sply03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sply00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Q5A_014170 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sply03400
]
Q5A_014170 (xthA)
Enzymes [BR:
sply01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
Q5A_014170 (xthA)
DNA repair and recombination proteins [BR:
sply03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Q5A_014170 (xthA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
ANS43285
LinkDB
All DBs
Position
3001103..3001909
Genome browser
AA seq
268 aa
AA seq
DB search
MKFVSFNINGLRARPHQLSAIIEQHQPDVIGLQETKVHDDMFPLEEVSQHGYHVFYHGQK
GHYGVALLTKDEPIAVRRGFPTDDDDAQRRIIMADLATPQGTLTVINGYFPQGESRDHPI
KFPAKSRFYQDLQNYLEQQLSVESPVLVMGDVNISPSDYDIGIGEESRKRWLRTGKCSFL
PEEREWMDRLLSWGLVDTYRHANPERNDEFSWFDYRSRGFDENRGLRIDLLLASTPLAAR
CTATGIDYQIRGMEKPSDHAPVWAEFSL
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttgtctctttcaatatcaatggactgcgcgcgcgtccgcatcaactgtccgca
attatcgaacagcaccaacccgacgtgattggcctgcaggaaaccaaagttcacgatgac
atgttcccactggaagaagtcagtcagcatggctatcacgtgttctatcacggccaaaaa
ggccactacggcgtcgcactgctgaccaaagacgaaccgatcgccgtacgccgcggattc
cctaccgatgacgacgacgcacagcgtcgcatcatcatggccgatctggccacacctcaa
ggcacgttgaccgtaattaatggctatttcccgcagggagaaagccgtgaccatccgatc
aaattcccggccaagtcacgcttctatcaggatctgcaaaactacctggagcagcaactg
tcggtggaatcgccggtgctggtgatgggcgacgtaaatatcagcccaagtgattacgat
atcggtatcggtgaagaaagccgtaaacgttggttgcgcaccggcaaatgttccttcctg
ccggaagagcgtgaatggatggaccgcttgctgagttggggtctggtggatacctaccgc
catgccaacccagagcgcaacgatgaattctcgtggttcgattaccgctcacgcggcttc
gacgagaaccggggcctacgcatcgatctgctgctggccagcacgccgctggcagcgcgc
tgcaccgcaaccggcatcgattatcagatccgcggaatggaaaagccttcggaccatgcc
ccggtctgggctgaattctcgctgtaa
DBGET
integrated database retrieval system
