Serratia inhibens: Q5A_014410
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Entry
Q5A_014410 CDS
T04576
Symbol
fadD
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sply
Serratia inhibens
Pathway
sply00061
Fatty acid biosynthesis
sply00071
Fatty acid degradation
sply01100
Metabolic pathways
sply01212
Fatty acid metabolism
sply02024
Quorum sensing
sply04146
Peroxisome
Module
sply_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sply00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Q5A_014410 (fadD)
00071 Fatty acid degradation
Q5A_014410 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Q5A_014410 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
Q5A_014410 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sply01004
]
Q5A_014410 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sply04147
]
Q5A_014410 (fadD)
Enzymes [BR:
sply01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Q5A_014410 (fadD)
Lipid biosynthesis proteins [BR:
sply01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Q5A_014410 (fadD)
Exosome [BR:
sply04147
]
Exosomal proteins
Exosomal proteins of breast milk
Q5A_014410 (fadD)
Exosomal proteins of breast cancer cells
Q5A_014410 (fadD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
DUF4235
Motif
Other DBs
NCBI-ProteinID:
ANS43333
LinkDB
All DBs
Position
complement(3049368..3051089)
Genome browser
AA seq
573 aa
AA seq
DB search
MIMSNDLRSNTLDKVWLKRYPADVPAEIDADRYSSLVEMFENAVQRYADQPAFINMGEMM
TFRKLEERSRAFAAYLQNELGLQKGDRVALMMPNLLQYPIALFGILRAGMVVVNVNPLYT
PRELEHQLNDSGASAIVIVSNFAHTLEKVVFNTQVKHVILTRMGDQLSTAKGTLVNFVVK
YIKRLVPKYHLPAAISFRSALQRGRRLQYVKPGIINSDLAFLQYTGGTTGVAKGAMLTHR
NMQANLAQCNAAYGPLFRDGQELIVTALPLYHIFALTVNCLLFLELGGRNLLITNPRDIP
GLVKELAKYPFTAISGVNTLFNALLNNEDFHKLDFSTLRFSVGGGMSVQKAVADKWEKVT
GRHLLEGYGLTECAPLVTCNPHDLTHYSGSIGLPVSSTDIRLVDDNGHDVPVGEPGELWV
KGPQVMLGYWQRPDATDEVLKEGWLATGDIVTVDESGFVRVVDRKKDMILVSGFNVYPNE
IEDVVSQHPKVLESAAIGVPNDVSGETVKICVVKKDASLTKEELLTHCRRYLTGYKVPKI
VEFRDELPKSNVGKILRRELRDEQKKPLAADAA
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgataatgagcaatgatttgaggagtaataccttggataaggtctggttaaaacgttac
ccggcggatgttccggcagagatcgacgccgatcgttattcatctttggtcgaaatgttt
gaaaatgcggttcagcgctatgccgatcaaccggctttcattaacatgggcgagatgatg
accttccgtaagctggaagaacgcagtcgggccttcgccgcttacctgcaaaatgagctg
ggcttgcagaagggcgatcgcgttgccctgatgatgccaaacctgttgcagtatccgatc
gcgctattcggtattttgcgcgccggcatggtggtggtaaacgttaacccgttgtatacg
ccgcgcgagctggaacaccaactgaatgacagcggcgccagtgccatcgtaatcgtctcc
aactttgcccacacgttggaaaaagtggtgttcaatacccaggtaaagcatgtgatcctg
acgcgtatgggcgatcagctctccaccgccaaaggcacgttggttaacttcgtggtgaaa
tacattaagcgactggtgccgaaataccacctgccggccgcgatttctttccgtagcgct
ttgcagcgtgggcgccgcttgcagtatgtcaaacctggcatcatcaattccgatctggcg
ttcctgcaatataccggcggtaccactggcgtggcgaaaggcgcgatgctgacgcaccgc
aatatgcaggccaatttggcgcagtgcaacgccgcctacgggccgctgttccgcgatggt
caggaattgatagtcactgcattgccgctctaccatatctttgcgctgacggtgaattgc
ctgctgtttctcgagttgggcggacgtaatttgctgattaccaacccgcgcgatattccg
gggttggtgaaagagctggccaaatacccattcactgccatcagcggcgtcaatacgctg
tttaatgcgctgctcaataatgaagattttcacaagctggatttttcgactttgcgtttc
tcggtcggcggcgggatgtcggtacagaaggcggttgcggacaagtgggagaaggtcacc
ggccggcatttgcttgagggctatggcctgacagaatgtgcgccgctggtcacctgtaac
ccgcacgatctgacgcactacagcggcagcatcggcctgccggtatcttccaccgatatt
cggctggtggatgataatgggcacgatgtgccggtgggggaaccgggcgaactgtgggtt
aaaggaccgcaagttatgttaggctattggcagcggccggacgccaccgatgaagtgtta
aaagagggctggctcgcaaccggcgatatagttacagtggacgagtcgggctttgtacgc
gtggtcgaccgcaagaaagacatgattctggtttccggttttaacgtttacccgaatgag
atcgaagatgtggtcagccagcatccgaaggtgctggaatccgcggcgattggcgtaccg
aatgacgtatccggtgaaacggtcaagatttgcgtggtgaagaaagacgcctctctgacc
aaggaagagctgttgacccattgccgtcggtacctgaccgggtataaagtgcctaaaatt
gttgagttccgcgacgagttgccgaaatctaacgtcggtaaaattttgcggcgagaactg
cgtgatgagcagaaaaagccgctagcggcagatgccgcctag
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