Serratia inhibens: Q5A_015145
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Entry
Q5A_015145 CDS
T04576
Symbol
ddpA_4
Name
(GenBank) putative D,D-dipeptide-binding periplasmic protein DdpA
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
sply
Serratia inhibens
Pathway
sply02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sply00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Q5A_015145 (ddpA_4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sply02000
]
Q5A_015145 (ddpA_4)
Transporters [BR:
sply02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Q5A_015145 (ddpA_4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
ANS43478
LinkDB
All DBs
Position
complement(3204306..3205874)
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AA seq
522 aa
AA seq
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MKAFVPSLLFLAVAASFNTQAATPANTLVIAQSIDDVVSFDPAQGFELTTVQSFNSLYQR
LIQSDPQNPIDLKPTLAGEWQAGSDNRSLTFSLRPDAKFSSGNPLRPEDVIFSLSRVVKL
NLEPSFILTQLGWNAKNVDQHLIKVDDHKVKISWSENVSPAFVLSLLSAPVSSIVDAKEA
LAHQQGDDLGHQWLNSHSAGSGPYKIRTYVPHEVVVLDANPTSPEGAPTLKTVLIKNVPD
PAARRLLLEQGDADIARNLGADQMAALKDKPGVKPLAIPYASLYFLQFNAKASPALGNPA
FWEAARWLFDYNGIANDLLKGQFQNHQAFLPEGYLGALKERPYSFNPQKAKEILAKAGLK
NVSFKLDVNNQPPYLDIAQALQASFAQGGVKVDLVPGLSAQVSTKVKTLNYDAVLTSWGP
DYFDPNTNAAAFAYNPEDGSKTLAWRANWQIPALSKLTLAATAENDTAKRVADYQQLQKS
VQQSSPFVIGLQARSLIAVRDNLKGYVQGINPDMVFYSKVSK
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcgttcgttccttctttgctctttttggccgtagcggccagtttcaacacgcag
gcggcgaccccggcgaatacgttggtgattgcccagtcaattgatgacgttgtcagcttt
gaccctgcccagggctttgaattgactacggtacaatcgttcaacagcctgtatcagcgc
ctgatccagtcggacccgcagaacccgatcgacctcaaacctacgctggccggcgaatgg
caggcgggcagcgataaccgcagcctgaccttcagcctgcggccggacgccaaattctcc
agcggcaacccgctgcgcccggaggacgtgatcttctcgctatcaagggtggtgaagctg
aacctggagccgtcgtttatcctcacccaactgggttggaatgccaaaaacgtcgaccag
cacttgatcaaggttgacgaccataaggtgaaaataagctggagcgaaaacgtcagcccg
gcgttcgtgctcagcctgctgtcggcgccggtgtcctcgattgtcgatgccaaagaagcg
ctggcgcaccagcagggcgatgatttggggcatcagtggctgaacagccattccgccggc
agcggcccgtataaaatccgcacctatgtaccgcatgaagtggtggtgctggatgccaac
cctacctcgccggaaggcgcaccaacgctgaaaaccgtcttgatcaagaacgtgccggat
ccggctgcgcgccgtttgctgctggagcagggcgacgccgatattgcacgtaacctgggc
gcagaccagatggcggcgctgaaagacaagccgggcgtaaaaccgctggcgatcccgtat
gcctcactctacttcctgcagttcaacgccaaggcgtcgccggcgctgggcaatccggcg
ttctgggaagcggcgcgttggctgttcgactataacggcatcgccaacgatctgttgaaa
gggcagttccagaaccaccaggccttcctgccggaagggtatctgggtgcgctgaaggag
cggccgtacagtttcaatccgcaaaaagccaaagaaatcctggcgaaggccggcctgaaa
aacgtcagcttcaagctggacgtcaacaaccagccgccgtacctggatatcgcccaggcg
ttgcaggccagcttcgcccaggggggcgtgaaggtggatctggtgccggggctaagcgcg
caggtatccaccaaggtcaaaaccctgaactatgacgcggtcctgacctcgtgggggccg
gattattttgacccgaacaccaacgccgccgccttcgcctataatccggaagacggcagc
aaaaccctggcctggcgcgccaactggcaaattcctgctctgagtaaactgacgctggcg
gccacggcggagaatgacaccgccaaacgggtggcggattaccaacagttgcagaagtcc
gttcagcaaagctcgccgtttgttatcggtctgcaagcgcgcagcctgatcgccgtgcgc
gacaatctgaaaggctacgtgcagggcatcaatcctgacatggtgttctacagcaaggtc
agcaagtaa
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