KEGG   Serratia inhibens: Q5A_015475
Entry
Q5A_015475        CDS       T04576                                 
Symbol
vapC_1
Name
(GenBank) tRNA(fMet)-specific endonuclease VapC
  KO
K18828  tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
Organism
sply  Serratia inhibens
Brite
KEGG Orthology (KO) [BR:sply00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sply03016]
    Q5A_015475 (vapC_1)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:sply02048]
    Q5A_015475 (vapC_1)
Transfer RNA biogenesis [BR:sply03016]
 Prokaryotic type
  tRNA degradation factors
   Q5A_015475 (vapC_1)
Prokaryotic defense system [BR:sply02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   VapC-VapB
    Q5A_015475 (vapC_1)
SSDB
Motif
Pfam: PIN
Other DBs
NCBI-ProteinID: ANS43544
LinkDB
Position
complement(3267074..3267472)
AA seq 132 aa
MFSHMLDTNMVIYVIKRRPFEVLEMFNQHAGNMVISSITYAELIHGVEKSARPAANSRVI
DDFVSRLDILDYGPKAAAHYGNIRSALERQGTPIGVNDLHIAGHARSEGLILVSNNMREF
ERVEGLRLENWL
NT seq 399 nt   +upstreamnt  +downstreamnt
atgtttagccatatgctggataccaatatggttatctatgtcatcaagcgccggccgttt
gaagtgctggagatgttcaatcagcacgcgggcaacatggtaatctcatcgatcacttac
gcggagttgatccacggggtagaaaaaagtgcccggccggccgcgaactcgcgggtgatt
gacgacttcgtttcacgattggatatcctcgattacggccccaaggccgctgcgcattac
ggtaatatccgcagtgcacttgaacggcagggcacgcctattggtgtcaacgacctgcat
attgccggacacgcgcgcagcgaaggtttgattcttgttagcaataacatgcgtgaattt
gaacgtgtcgaaggcctgcgcctcgagaattggttgtaa

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