KEGG   Serratia inhibens: Q5A_016620
Entry
Q5A_016620        CDS       T04576                                 
Symbol
alkB
Name
(GenBank) Alpha-ketoglutarate-dependent dioxygenase AlkB
  KO
K03919  DNA oxidative demethylase [EC:1.14.11.33]
Organism
sply  Serratia inhibens
Brite
KEGG Orthology (KO) [BR:sply00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sply03400]
    Q5A_016620 (alkB)
Enzymes [BR:sply01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.33  DNA oxidative demethylase
     Q5A_016620 (alkB)
DNA repair and recombination proteins [BR:sply03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   Direct repair
    Q5A_016620 (alkB)
SSDB
Motif
Pfam: 2OG-FeII_Oxy_2 2OG-FeII_Oxy_3
Other DBs
NCBI-ProteinID: ANS43770
LinkDB
Position
complement(3494882..3495529)
AA seq 215 aa
MTLDLFEDAVPPPWREQIAPGAVVMHGFVRDHGPELLAAVKGVIAQVPWRHMTTPGGHVM
SVAMSWCGNGWSSDSRGYRYSERDSRSGKRWPPIPAIFMALADEAAQQAGFAPFVPDSCL
INRYDPGSKLSLHQDKDEHDFGSPIVSVSLGLPAVFQFGGMQRSDRAQRIPLAHGDVVVW
GGPSRLCFHGIMPIKEGYHSLVGPHRINITLRKAL
NT seq 648 nt   +upstreamnt  +downstreamnt
atgactctcgatcttttcgaagacgccgtaccgccgccttggcgtgagcagatcgctccg
ggcgcggtggtgatgcacggttttgtgcgcgaccacgggccggagctgctggcggcggtg
aagggggtgatcgcgcaggtaccctggcggcacatgaccacgccgggcggccatgtgatg
tcggtggcgatgagctggtgcggcaacggctggagcagcgacagccgcggctatcgttat
tccgagcgcgattcgcgcagcggcaaacgttggccgcccatcccggctatttttatggcg
ctggcggacgaagcggcgcagcaggcgggttttgcgccgttcgtgccggattcgtgtctg
ataaaccgctacgatcccggcagcaaactgtcgctgcatcaggataaagacgagcacgat
ttcggctcaccgatcgtgtcggtctcgctgggattaccggcggtgtttcagttcggcggc
atgcagcgcagtgaccgggcccagcgcattccactcgcgcacggcgacgtggtggtgtgg
ggcggcccgtcgcggctgtgctttcacggcattatgccgatcaaagagggctaccattcg
ctggtggggccgcacaggatcaacatcaccttacgcaaggcgctttag

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