KEGG   Serratia inhibens: Q5A_018850
Entry
Q5A_018850        CDS       T04576                                 
Symbol
vapC_2
Name
(GenBank) tRNA(fMet)-specific endonuclease VapC
  KO
K18828  tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
Organism
sply  Serratia inhibens
Brite
KEGG Orthology (KO) [BR:sply00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sply03016]
    Q5A_018850 (vapC_2)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:sply02048]
    Q5A_018850 (vapC_2)
Transfer RNA biogenesis [BR:sply03016]
 Prokaryotic type
  tRNA degradation factors
   Q5A_018850 (vapC_2)
Prokaryotic defense system [BR:sply02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   VapC-VapB
    Q5A_018850 (vapC_2)
SSDB
Motif
Pfam: PIN EspA_EspE
Other DBs
NCBI-ProteinID: ANS44202
LinkDB
Position
complement(4002663..4003052)
AA seq 129 aa
MYMFDTNTVSHLFRRHPGLLSAMEKVPPSTVCISSITEAELLFGVAKRQSKALKAMVTAF
LAAVTVYDWDSEAARCYGVMRASMEKKGKVLGALDQLIAAHALSRGATMVTSDRAFGMVS
GLDVEDWTL
NT seq 390 nt   +upstreamnt  +downstreamnt
atgtatatgtttgacaccaataccgtgagccacctgtttcgccggcacccaggtttgctg
agtgcgatggaaaaggtgccgccttccaccgtatgcatttccagcatcacggaggcggag
ctgctttttggcgtggccaaacggcagagtaaagcgttgaaagccatggtaacggcgttt
ttagccgcggtgaccgtttatgactgggatagcgaagctgcccgctgttatggcgtaatg
cgggcgagcatggagaaaaaaggcaaagtcctgggcgcgctggaccagttgattgccgcg
catgcgcttagccggggcgcgacaatggtcactagcgatcgggccttcggcatggtgtcc
gggctggacgttgaagactggaccctatag

DBGET integrated database retrieval system