Serratia inhibens: Q5A_020135
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Entry
Q5A_020135 CDS
T04576
Symbol
recB
Name
(GenBank) RecBCD enzyme subunit RecB
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
sply
Serratia inhibens
Pathway
sply03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sply00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Q5A_020135 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sply03400
]
Q5A_020135 (recB)
Enzymes [BR:
sply01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Q5A_020135 (recB)
DNA repair and recombination proteins [BR:
sply03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Q5A_020135 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ANS44450
LinkDB
All DBs
Position
complement(4267921..4271472)
Genome browser
AA seq
1183 aa
AA seq
DB search
MTEAAPQRLDPLTLPLFGERLIEASAGTGKTFTIGALYLRLLLGLGQAAAFSRPLTVEEI
LVVTFTEAATEELRGRIRSNIHALRIACVRGLSKDPLLSALMAEIDDLPDAAAQLLAAER
QMDEAAIYTIHGFCQRMLTHNAFESGILFEQTLVQDELPLRRQACADFWRRHCYPLPLGV
ARAVSQEWSGPEALLADLSGYLSGEAPTLRRPPKDEETVLIRHEQIVARIDAIKARWLAV
AGELEALISQSGVDKRSYSSKHLPNWLHKVGEWVVLETQDYLLPKELDKFRQSVLLDKTK
KGEPPRHELFVAIDELFDEPLTLRDLIMARALSEIRLSIQQEKRQRAELGFDDLLSRLDS
ALQSEGGDRLAQAIRQRYPVAMIDEFQDTDPQQYRIFQKLYVGRPECGLLLIGDPKQAIY
AFRGADIFTYMRARSEVSAHYTLETNWRSSPAMVGSVNHLFTQVEKPFLFGQIPFIEVAA
AEKNRGLAFELHKQLQPAMQFWLQQGEGVGVSEYQQLMARLCATQIRDWLSAGQSDQAWL
VDGDKRRAVQASDITVLVRSRNEAALVRDALSALAIPSVYLSNRDSVFDTPEAKDLLWLL
QAVLAPEQERTLRSAMATGLMGLDAQALDGLNRNERDWDSLVNEFDKYRTLWLRRGVLPM
LREVMNQRHLAENLLASHGGERRLTDIMHLGELLQEASAQLDSEHALVRWLAQQIAQPNR
QSDNQQLRLESDRHLVKVITIHKSKGLEFDLVWLPFVGNFRQQQQVLYHDRQSFQALLDL
NANEESIEWAEEERLAEDLRLLYVALTRSVYHCSIGIAPLIQGTRKKQGDTDLHRSALGY
LVQAGQAGDAAWLQQRLQQLAGEGVALSLVEQLDEQAWLPQTPALTELAAKSFTRPVQDF
WRVTSYTGLQQQGSGLMQDLLPRLDVDAAGEQALDSEPALTPHTFPRGAAPGTFLHSLFE
TLDFTQPLDEQWLLEQLQQQGFAEHWQPILQAWMQVLLNVPLNDAGVSLSALAPQYKQAE
LQFYLPIEKLLQAGELDKLVKKHDPLSARCPELAFQQVQGMLKGFIDLVFCWQGKYYLLD
YKSNWLGEDSSAYTRAAMEQAMAEHRYDLQYQLYTLALHRYLRHRLPDYDYRRDFGGVIY
LFLRGVDAQHPGNGIFACCPAPQLVEGMDRLFSGEAITAEDEP
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atgacagaggccgccccgcagcggcttgatccgctgacgctgccgctgtttggcgaacgg
ctgatagaagcgtcggcggggaccggcaaaacctttaccatcggtgcgctgtatctgcgc
ctgttgcttggcctgggccaggcggcggccttttcccggccgctgacggtggaggagatt
ctggtggtgacctttaccgaggccgccaccgaggagctgcgtgggcgtattcgcagtaat
atccatgcgttacgcattgcttgcgtccgcggtctcagcaaggatccgttattgtctgcg
ctgatggcggagattgacgatcttcccgatgccgccgcgcaactgctagcggccgagcgg
cagatggacgaggcggcgatctacaccattcacggcttttgccagcgcatgctgacccac
aacgccttcgagtccggcattctgtttgagcaaacgctggtgcaggatgaactgccgttg
cgtcgccaggcctgtgcagacttctggcgtcgccattgttatccgctgccattgggcgtt
gcacgggccgtgagccaggaatggagcggcccggaggcactgctggcggatctttccggc
tatctgagcggtgaagcgccaacgctgcgtcggccgccgaaagatgaagaaacggtattg
atacgccatgagcagatcgtggcgcgaattgatgccattaaagctcggtggctggcggtg
gcgggggagctggaggcgctaatcagccagtccggcgttgataagcgcagctacagcagc
aaacacctgcctaactggttgcataaggtaggcgaatgggtggtgctggaaacccaggat
tacctgctgccgaaagagctggataaattccgtcagtcggtgctgctggataaaaccaaa
aagggcgaaccgccccgccatgaactgtttgtggcgatagatgaattatttgatgaaccg
ctgacgctgcgcgatttgattatggcgcgggcactgagtgagatacgtctctccatacaa
caagagaaacgccagcgtgccgagctgggctttgacgatctgctaagccggctggacagt
gcgctgcaaagtgaaggcggcgatcgattggcgcaggcgattcgccagcgttatccggtg
gcgatgatcgatgagttccaggataccgacccacagcaataccgtatcttccaaaagctc
tacgttggccggccggaatgcggcctgttgctgataggcgacccaaaacaggccatttac
gccttccgcggtgccgacatttttacctatatgcgcgcccgttctgaggtaagcgcccac
tacacgcttgagactaactggcgctcgtcaccggcaatggtgggtagcgttaaccatctg
tttactcaggtggaaaagcccttcctgttcggtcaaattccctttattgaggtggcggcc
gccgagaaaaatcgagggttggcttttgagctgcataaacagttgcagccggcgatgcag
ttttggttgcagcagggtgaaggtgttggcgttagtgagtaccaacaattgatggcgcgc
ctgtgcgccacgcaaatccgtgactggctcagtgccgggcaaagtgaccaggcctggctg
gtggacggcgataaacggcgggcggtgcaggcctccgatattaccgtgttggtgcgtagc
cgtaatgaagcggcgttggtgcgtgatgcactcagcgccctggctattccttcggtctat
ttgtccaaccgcgacagcgtgtttgataccccggaagccaaggatttgctgtggctgttg
caggcggtgttggcaccggagcaggagcgcacgttgcgcagcgccatggcgaccggtttg
atggggttggatgcgcaagcgttggacggcttgaaccgcaacgaacgcgactgggattcg
ctggtcaatgagttcgataaataccgtacgctctggctgcgtcgcggcgtgttgcccatg
ctgcgtgaggtgatgaatcagcgccacctggcggaaaacctgctggccagccacggcggt
gagcgtcggttgaccgacataatgcacttgggggagctgttgcaagaggcctctgcgcag
ctcgacagcgaacatgcgttggtgcgctggctggcgcagcagattgcccagccaaatcgt
cagtccgacaaccagcaactgcgactggaaagcgatcgccatctggtgaaggtgatcacc
atccataaatcgaaagggttggagttcgatctggtttggctgccgtttgtcggcaatttt
cgccagcagcagcaggtgctgtaccacgatcggcagagtttccaggccctgcttgacctc
aacgccaatgaagaaagtatcgaatgggcggaagaagagcggttggcggaggatttgcgc
ctgctgtacgtagccttgacccgctcggtataccactgcagcatcggcatagcgccgttg
attcagggcacgcgcaagaaacagggtgataccgatttgcaccgcagcgcgctgggttac
ctggtgcaggccggccaggccggagatgcggcctggctgcaacaacgtctacagcaactg
gctggagagggcgttgcgctgtcgttggtggaacaattggatgaacaagcctggttgccg
cagacaccggcgttaaccgaactggcggcaaaaagcttcacgcgtccagtgcaggatttc
tggcgtgtgaccagttacaccggcctgcagcaacagggttctggcctgatgcaggatctg
ctgccacggctggatgtcgatgccgcaggcgaacaggcgctggacagtgagccagcgctc
acaccgcataccttcccgcgcggcgcagcaccgggaaccttcctgcacagcctgtttgaa
acgctggatttcacccaaccccttgatgagcaatggctgcttgaacagttgcaacagcaa
gggtttgccgagcactggcaaccgatactgcaggcatggatgcaggtgttgctgaatgtc
ccgctcaatgatgccggtgtttcgttgtcggcgctggcaccgcagtataaacaggccgag
ctgcagttttacttacccatagaaaaactgttgcaggcgggggaactggataaactggtg
aaaaagcacgatccgctttcagcccgctgcccggagctggctttccagcaggtgcaggga
atgttgaaggggtttatcgacctggtattttgctggcagggaaaatactacctgctggat
tacaaatccaactggttaggcgaggacagcagcgcttatacccgagcggcgatggagcag
gcgatggcggaacaccgctatgacctgcaatatcagctgtacacgctggcactgcatcgt
tatctgcgccatcggttgccggattatgactatcggcgcgacttcggcggggtgatttac
ttgttcctgcgcggagtagacgcacagcacccaggcaacggtattttcgcctgttgccca
gctccgcagttggtggagggcatggaccgcctgttcagcggcgaagccattacggcggag
gatgaaccatga
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