Serratia inhibens: Q5A_020190
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Entry
Q5A_020190 CDS
T04576
Symbol
rppH_3
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
sply
Serratia inhibens
Pathway
sply03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sply00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Q5A_020190 (rppH_3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sply03019
]
Q5A_020190 (rppH_3)
Messenger RNA biogenesis [BR:
sply03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Q5A_020190 (rppH_3)
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Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Nudt16-like
Motif
Other DBs
NCBI-ProteinID:
ANS44461
LinkDB
All DBs
Position
complement(4284157..4284687)
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AA seq
176 aa
AA seq
DB search
MIDDDGYRPNVGIVICNRQGQVLWARRYGQHSWQFPQGGINPGETAEQAMYRELFEEVGL
SKKDVRILASTRNWLRYKLPKRLVRWDTKPVCIGQKQKWFLLQLMCNDADINMQRSSTPE
FDGWRWVSFWYPVRQVVSFKRDVYRRVMKEFAVTVMPMQEQATQRQQPPAYRRKRG
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgatgatgatggctaccgcccgaatgttggtatcgtaatctgtaatcgtcagggg
caggtcctttgggcccgccgttacggtcaacactcctggcagtttccccaaggtgggatt
aaccctggcgaaaccgcagaacaggcaatgtaccgtgagctgttcgaagaagtggggctg
agcaaaaaggatgtgcgcatcctggcctctacccgcaactggttgcgctataaattgcca
aaacgtttggtgcgttgggacacaaagccggtttgtatcggccaaaagcagaaatggttt
ttgttgcagttaatgtgcaatgacgcggatatcaatatgcaacgcagcagcacgccggag
ttcgacggttggcgctgggtgagcttttggtatccggtgcgccaggtggtgtcgttcaaa
cgcgacgtttaccgccgggtgatgaaagaattcgccgtcaccgtgatgccgatgcaggag
caggcaacacagcggcagcagccccccgcttatcgccggaagagaggttaa
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