Serratia inhibens: Q5A_021090
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Entry
Q5A_021090 CDS
T04576
Symbol
mrcB
Name
(GenBank) Penicillin-binding protein 1B
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
sply
Serratia inhibens
Pathway
sply00550
Peptidoglycan biosynthesis
sply01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sply00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Q5A_021090 (mrcB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sply01003
]
Q5A_021090 (mrcB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sply01011
]
Q5A_021090 (mrcB)
Enzymes [BR:
sply01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
Q5A_021090 (mrcB)
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Q5A_021090 (mrcB)
Glycosyltransferases [BR:
sply01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
Q5A_021090 (mrcB)
Peptidoglycan biosynthesis and degradation proteins [BR:
sply01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
Q5A_021090 (mrcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
PBP1_TM
UB2H
Transpeptidase
UvrB_inter
Motif
Other DBs
NCBI-ProteinID:
ANS44640
LinkDB
All DBs
Position
complement(4485085..4487598)
Genome browser
AA seq
837 aa
AA seq
DB search
MAGDDREPIGRKGKQPKRTASGKPPRRRRDDDYDDYEEDDQQDDEYEDEEESVPRKVKAT
PPRKKRRWLGLLIKLILVVAVLLAIYGVYLDSQIRSRIDGKVWQLPAAVYGRMVNLEPGM
PYSKKEMVDLLEGMQYRQVSRMTRPGEFTVQANSIEMLRRPFDFPDGKEGQIHARLDFQN
NRLAKIENMENQRNFGFFRLDPRLITMLQSPNGEQRLFVPRAGFPDLLVDTLIATEDRHF
YEHDGISPYSIGRAVLANLTAGRAVQGGSTLTQQLVKNLFLTNERSLWRKANEAYMALLV
DYRYSKDRILELYLNEVYLGQSGSDQIRGFPLASLYYFGRPVDELSLDQQALLVGMVKGA
SLYNPWRNPTLALERRNLVLKLLQNQGVIDAELYNMLSARPLGVQPKGGVITPQPAFMQM
VRQELQAKLGDKVNDLSGVKIFTTLDPVSQDAAEKAVEDGIPALRAARHVKDLEAAMVIV
DRFSGEVRAMVGGANPQFAGFNRAMQARRLVGSLAKPPTYLTALSEPDKYRLNTWLADQP
LSLKQPNGSLWQPNNYDRKFRGQVMLVDGLAFSLNVPTVNLGMAVGLDQISATLQRLGIP
KAEINPVPSMLLGAIGLTPMEVAQEYQTIASGGNRAPLSAVRSVIAEDGAVLYQSFPQAE
RMVPAQAAYLTLYAMQQGVARGTSRSLSVKFPNYNLAAKTGTTNDLRDSWFAGIDGKEVA
IAWVGRDNNGPAKLTGANGALTLYRRYLENQTPLPLMLQPPEGINQIGIDSGGNFVCGGG
GRSIPVWTDNPQGLCQASQAAQQQQQQQQQQQQQQAGEQKDGDGVAGWIKDMFGQGQ
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atggctggggatgaccgcgagcccatcgggcgcaaagggaaacaaccgaaacgcaccgcg
tcgggcaagccgccgcgccgtcgccgagacgacgattatgatgattacgaggaagacgat
cagcaagatgatgaatatgaagacgaggaggaaagcgtgccgcgtaaggtaaaagcgact
ccgccgcgtaaaaaacgccgttggcttggcctgcttatcaaactgattctggtggtcgcg
gttctgttggcgatctacggcgtgtacctggattcgcagatccgcagccgcattgacggc
aaggtctggcagttgccggcggcggtctatggccgcatggtcaacctggaaccgggcatg
ccgtacagcaagaaggaaatggtcgatctgctggagggcatgcaataccgtcaggttagc
cgcatgacccgtccgggcgaatttaccgtgcaggccaacagcatcgagatgctgcgccgc
ccgtttgacttcccggatggtaaagaggggcagatccacgcccgcctggatttccagaac
aaccgtttggcgaaaatcgagaacatggagaaccaacgtaacttcgggttcttccgtctc
gatccgcgcctgatcaccatgctgcagtcaccgaacggcgaacagcgtctgttcgtgccg
cgcgccggtttcccggacctgctggtggatacgctgattgccaccgaagaccgtcatttc
tacgagcatgacggcatcagcccgtactccatcggccgagcggtgctggcgaacctgacc
gccgggcgcgcggtgcagggcggcagtactctgacgcagcagttggtgaagaacctgttc
ctgaccaacgaacgctcgctatggcgtaaggccaacgaagcctatatggcgctgctggta
gattaccgttacagcaaggaccgtattcttgagctgtatctgaacgaggtgtacctcggt
cagagcggcagcgaccagatccgcggtttcccgttggccagcctgtattacttcggccgt
ccggtggatgaactgagcctggatcagcaagcgttgctggtggggatggtgaaaggtgcg
tcgctgtataacccttggcgcaacccgacgctggcgctggagcgccgtaacctggtgctc
aagctgttgcaaaaccagggggtgatcgacgccgagctgtacaacatgctcagcgcaagg
ccactgggcgtgcagccgaaaggtggggtgatcacgccgcagccggcgtttatgcagatg
gtgcgtcaggaactgcaggccaagctgggcgacaaggtgaacgacctgtccggagtgaaa
atcttcactacgctggatccggtttctcaggatgcggcggaaaaagcggtcgaagacggc
attccggcgctgcgtgccgcccgccacgtaaaagatctggaagcggcgatggtgattgtc
gatcgcttcagcggtgaggtgcgcgccatggtcggcggtgccaatccgcagttcgccggt
tttaaccgtgcgatgcaggcgcgtcgcctggtcgggtcgctggccaagccgccaacctat
ctgaccgcgctttccgagccggacaaataccgcctgaatacctggctggcggaccagccg
ctgtcgctgaaacaaccgaatggcagcctgtggcagccgaacaactacgaccgcaaattc
cgcggacaggtgatgttggtggatggcctggccttctcgctcaacgtgccgacggtgaat
ctgggtatggcggtcggactggatcaaatcagtgccacgctgcagcgcctgggtattccg
aaagcggaaatcaatccggtgccttcgatgctgctgggggcgattggcctgacgccgatg
gaagtggcgcaggaataccaaaccatcgccagcggcggcaaccgtgcgccgctgtctgcg
gtgcgttcggtgatcgcggaagacggtgcggtgctgtaccagagcttcccgcaggcggaa
cgcatggtaccggctcaggccgcttacctgacgttgtacgccatgcaacagggcgtagcg
cgcgggacctcacgttctctgtcggtgaagttccccaactacaacctggcggcgaaaacc
ggtaccaccaacgatctgcgcgacagctggtttgccggtatcgacggtaaagaagtggct
atcgcctgggttggccgtgataacaacggcccggccaagctgaccggtgccaacggtgcg
ctgactctctatcgccgttacctggaaaaccagacgccgctgccgctgatgctgcagccg
ccggaaggtatcaaccagattggcatcgactccggcggtaactttgtctgtggcggcggt
gggcgtagcatcccggtgtggactgataatccgcaagggttgtgccaggcaagccaggct
gctcagcagcagcaacagcagcagcaacagcaacagcagcaacaggcgggtgagcaaaaa
gacggcgacggcgtcgccggctggatcaaggacatgttcggtcaagggcagtaa
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