Serratia inhibens: Q5A_024600
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Entry
Q5A_024600 CDS
T04576
Symbol
gmr_3
Name
(GenBank) Cyclic di-GMP phosphodiesterase Gmr
KO
K14051
c-di-GMP phosphodiesterase Gmr [EC:
3.1.4.52
]
Organism
sply
Serratia inhibens
Pathway
sply02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sply00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Q5A_024600 (gmr_3)
Enzymes [BR:
sply01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
Q5A_024600 (gmr_3)
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Ortholog
Paralog
GFIT
Motif
Pfam:
EAL
GGDEF
PdeR_N
PAS_9
PAS
PAS_4
GGDEF_2
PAS_10
RIP
DUF7877
Motif
Other DBs
NCBI-ProteinID:
ANS45319
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All DBs
Position
5258226..5260220
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AA seq
664 aa
AA seq
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MFADQGPMLLNAHFGTNSPYWRLAFDSNALELSAVKGKAHMAVALSAMQAAKIRRLSGIT
ASLDISIMLVGEPIHLHLVGRRINKLEWAGTASAFSDTKSVARDLVHGLSFAEQVVSEAN
SVIVIVDQHGRIQRFNRLSEEYTGLHEHDVIGKNVFQLFMSPEEAAASRRNIAGFFRNGS
SYEVERWVKTVKGERLFLFRNKFVHSGSGKNEVFLICSGTDITEERRAQERLRVLANTDI
ITGLPNRNAIQDKIIQAIAARGDNNVGLVYLDLDNFKKVNDAYGHMFGDRLLMEVSLAVL
GCLEPDQVLARLGGDEFLVLAQQANREQLQQLARRIIDRLKTPFRIGLIEVYTGCSIGIA
LCPEHGNDLDGLIRSADTAMYVAKEHGKRTFTVFSPEMNKRVAEYMWLDTNLRKGLEQNQ
LVVYYQPKIDALSGTVRSVEALVRWNSPERGLIPPLQFISYAEESGLIGPLGRWVLQTAA
KQAAQWQRQGLALRVAVNLSARQLVDDSIVEDLINVLQHNQLTPCLLDFELTESSLIEDE
KRARAVITRLRELGAQVHLDDFGTGYSSLAQLARIPLDAIKLDKSFVRGVNFNPVSQSLV
RAIVAAAEALKFRVIAEGVETESENRFLDEVGVDEKQGFLFARPMLPEQLEHWLQSYCPS
PPSA
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgttcgcagaccaaggtcctatgcttcttaacgcccactttggcaccaacagcccctac
tggcggctggcgttcgacagcaatgccctggagctgtccgcggtcaaaggcaaagctcat
atggccgtagcgctcagcgccatgcaggcggcaaaaatccggcgcctgagcggcattacc
gccagcctggatatctcaattatgctggtcggcgaaccgatccatttgcacctggtaggc
cgccggatcaacaagctggaatgggcaggcaccgcttccgctttcagcgacaccaagtcg
gtcgcccgcgatctggtgcatgggctttcctttgccgaacaggtggtatcagaagccaat
tcggtgattgtgattgtcgatcagcatggccgcatccaacgtttcaaccgcctgagcgaa
gaatataccggcctgcatgaacatgatgtcataggcaaaaacgtctttcagctgtttatg
agcccggaagaagcggcggcatcgcggcgaaatatcgccggttttttccgcaatggttca
tcctacgaggttgaacgctgggtcaaaacggtaaaaggcgagcggctgtttttgttccgc
aacaaattcgtccatagcggtagcggaaaaaacgaggtcttcctgatttgctcaggcacc
gacatcactgaagaacgccgggcccaagagcgcctgcgggtgctggccaataccgacatc
atcaccggcttgcccaatcgcaacgccattcaggacaaaattatccaggccattgcggca
cgtggtgacaacaacgttgggttggtgtacctcgatctcgataatttcaaaaaagtgaac
gacgcctacgggcatatgttcggcgatcgcttgttgatggaggtgtcgctggcggtgctc
ggctgtcttgaacccgatcaggttctggcgcgccttgggggcgacgaatttctggtgctg
gcccaacaggccaatcgcgagcagttgcaacagttggcccggcgtattatcgaccggttg
aaaacacccttccgcatcggccttatcgaagtctataccggctgttcgattggtatcgcg
ctgtgtccggaacacggtaacgatctcgacggcttgatccgtagcgccgacaccgccatg
tacgtcgccaaagagcacggcaaacgtacctttaccgtgttctcaccggaaatgaacaag
cgagtcgcggaatatatgtggctggacaccaacctgcgcaaaggtctggagcagaatcaa
ctggtggtttattaccaaccgaaaatcgatgcgctcagcggcacggtgcgcagcgtggaa
gccctggtgcgttggaactcgcccgaacgcggcctgatcccgccgttgcaattcatctct
tacgctgaagagtccgggctgattggcccgctcggccggtgggtgctgcaaaccgcggcc
aaacaggccgctcaatggcaacggcaggggctggcactgcgggtcgccgtaaatctttcc
gcacgtcagttggttgatgactccatcgtggaggatctgatcaacgtgctgcagcacaac
cagttaacgccatgcctgctggacttcgaactgacggaaagcagcctgattgaggatgag
aaacgtgcgcgcgcggtcatcacccggctacgcgaattgggtgcacaggttcatcttgac
gacttcggcaccggttattcctcgctggcgcagctggcgcgtatcccgctggatgccatt
aagctggataagagctttgtgcgcggcgtgaatttcaatccggtttcacagtcgctggtg
cgcgctatcgttgcggcggccgaggcgctgaaattccgggtgatcgccgaaggcgttgag
actgaaagcgagaacaggttcctggatgaggtgggcgtggacgaaaaacagggattcctg
tttgcgcggccaatgctcccggaacagctggaacattggctgcagtcttattgcccgtca
cccccctcagcgtaa
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