Serratia inhibens: Q5A_025070
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Entry
Q5A_025070 CDS
T04576
Symbol
rfaF_1
Name
(GenBank) ADP-heptose--LPS heptosyltransferase 2
KO
K02843
lipopolysaccharide heptosyltransferase II [EC:
2.4.99.24
]
Organism
sply
Serratia inhibens
Pathway
sply00540
Lipopolysaccharide biosynthesis
sply01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sply00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
Q5A_025070 (rfaF_1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
sply01005
]
Q5A_025070 (rfaF_1)
Enzymes [BR:
sply01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.24 lipopolysaccharide heptosyltransferase II
Q5A_025070 (rfaF_1)
Lipopolysaccharide biosynthesis proteins [BR:
sply01005
]
Core region
Q5A_025070 (rfaF_1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_9
Motif
Other DBs
NCBI-ProteinID:
ANS45406
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All DBs
Position
5360404..5361450
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AA seq
348 aa
AA seq
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MKILVIGPSWVGDMMMSQSLYRTLKAEHPTAEIDVMAPAWCRPLLARMPEVNQALSMPLG
HGALALGERRRLGRALRANGYDRAYVLPNSFKSALVPFFAQVPQRTGWRGEMRYGLLNDL
RVLDKAAFPLMVQRYVALAYDKQRIQRAEDLPQPLLWPQLKVSDEEIAETTAAFNLTDHR
PIIGFCPGAEFGPAKRWPHYHYARLAQMLIDQGYQIALFGSAKDHEAGEQIRAALDDDAR
VFCMNLAGETQLEQAVILLASCQAVVSNDSGLMHVAAALNKPLIALYGPSSPDFTPPLSD
KAKVIRLISGYHKIRKGDADQGYHQSLIDIQPQQVLDALTPLLAASEE
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatactggttatcggcccttcgtgggttggcgatatgatgatgtcgcaaagtctc
taccgcaccctgaaggccgagcacccgacagcggaaatagacgtgatggcacccgcctgg
tgccgtccgttgctggcgcgtatgccggaggtcaatcaggccctgtcgatgccattaggc
cacggcgcgctggcgctcggtgaacgccgccgtctggggcgcgcgctgcgcgccaacggc
tacgatcgcgcgtacgtgctgcccaactcgttcaaatccgcgctggtgccgttctttgct
caggtgccgcagcgtaccggttggcgtggcgaaatgcgctacggcctgctgaatgatctc
cgggtgctggacaaggcggcctttccgctgatggtacagcgctatgtggcgctggcttat
gacaagcaacgcattcagcgtgccgaagatctgccgcagccgttgctgtggccgcagttg
aaggtgagcgacgaagaaattgccgaaaccaccgcggccttcaacctgaccgatcaccgg
ccgattatcggtttctgcccgggggccgaatttggcccggccaaacgctggccacactac
cactacgcccggctggcccagatgctgatcgaccagggttatcaaatcgcgctgtttggc
tcggccaaggatcacgaagcgggcgaacaaatccgcgcggcgctggatgacgacgcccga
gtattttgtatgaatctggccggagaaacccagctggaacaggctgtgatcctgctggcg
tcctgccaggcggtggtcagcaacgactcaggcctgatgcacgttgccgcggccttgaat
aagccgctgatagccttgtacgggccaagcagcccggacttcacgccgccgctgtccgat
aaagccaaagttatccgcttaatcagtggttaccataagatacgcaaaggcgatgccgat
cagggttaccatcagagcctgatcgatattcagccacagcaggtgttggacgcgctgacg
ccgttacttgccgccagcgaggaataa
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