Serratia inhibens: Q5A_025125
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Entry
Q5A_025125 CDS
T04576
Symbol
waaA
Name
(GenBank) 3-deoxy-D-manno-octulosonic acid transferase
KO
K02527
3-deoxy-D-manno-octulosonic-acid transferase [EC:
2.4.99.12
2.4.99.13
2.4.99.14
2.4.99.15
]
Organism
sply
Serratia inhibens
Pathway
sply00540
Lipopolysaccharide biosynthesis
sply01100
Metabolic pathways
Module
sply_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
sply00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
Q5A_025125 (waaA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
sply01005
]
Q5A_025125 (waaA)
Enzymes [BR:
sply01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.12 lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
Q5A_025125 (waaA)
2.4.99.13 (Kdo)-lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
Q5A_025125 (waaA)
2.4.99.14 (Kdo)2-lipid IVA (2-8) 3-deoxy-D-manno-octulosonic acid transferase
Q5A_025125 (waaA)
2.4.99.15 (Kdo)3-lipid IVA (2-4) 3-deoxy-D-manno-octulosonic acid transferase
Q5A_025125 (waaA)
Lipopolysaccharide biosynthesis proteins [BR:
sply01005
]
Lipid A
Q5A_025125 (waaA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_N
Glycos_transf_1
Motif
Other DBs
NCBI-ProteinID:
ANS45417
LinkDB
All DBs
Position
5372428..5373705
Genome browser
AA seq
425 aa
AA seq
DB search
MLLRLYQVLLYLIQPLIWLRLLLRSRKAPAYRKRWAERYGFCAGKVVPGGIMLHSVSVGE
TLAAIPLVRALRHRYPYLPITVTTMTPTGSERVQSAFGKDVHHVYLPYDLPGSMRRFLDQ
VNPKLVIIMETELWPNLINALHQRQIPLVIANARLSARSAAGYKKIGGFVRDMLRRITLI
AAQNQEDGERFIELGLKRSQLTVTGSLKFDISVTPELAARAITLRRQWAPRRPVWIATST
HEGEETILLAAHRKLLEKHPDLLLILVPRHPERFPTAKELVQKAGFSYTLRSSGEIPSGS
TQVVIGDTMGELMLLYGIADLAFVGGSLVERGGHNPLEAAAHAIPVLMGPHIFNFKDICA
KLSQAEGLITVTDEDSLVKEVATLLTDEDYRRYYGRHAVEVLYQNQGALQRLLQLLEPHL
PPRSH
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgttgctgcgtttatatcaggtactactctacctcatccaacccctgatctggctccgc
ttactgctgcgcagccgcaaagctccagcctaccgtaaacgctgggcagaacgctatggc
ttctgcgccggaaaagtggtgccgggcggcatcatgctgcactccgtctccgtgggggaa
acgctggccgccatcccgttggtccgcgcactgcgccaccgctatccctatttaccgatt
actgtgaccacgatgacgccaacaggttcagagcgcgttcagtccgctttcggtaaagat
gttcatcatgtttatctgccttacgacctgcccggttccatgcgccgtttcctcgatcag
gtgaaccccaagctggttatcatcatggaaaccgagctgtggccaaatctgattaacgcg
ctgcaccagcgtcagatcccgctggtgatcgccaacgcacgcctttctgcccgctccgcg
gccggttataaaaaaatcggcggttttgtccgcgacatgctgcgccgcattacgttgatc
gcagcgcaaaatcaggaagatggcgaacgcttcatcgaacttggcctgaagcgctcacag
ctgaccgtgaccggcagcctgaaattcgacatttccgtcactcccgagctggctgcacgc
gcgatcacgttacgccgccaatgggcaccgcgtcgcccggtgtggatcgcgaccagcacc
catgaaggtgaagaaaccattctgctggcggcgcaccgcaagttactggaaaagcacccc
gacctgctgctgattctggtgccgcgtcatcctgaacgtttccctaccgccaaagaactg
gtgcagaaagccggtttcagctacaccctgcgcagcagcggtgaaatcccctccggcagc
acccaggtggtgattggcgataccatgggcgaactgatgctgctgtacggcattgccgat
ctggcctttgtcggcggcagcctggtagaacgcggcgggcataatccgctggaggccgcc
gcacacgcaattccggtactgatggggccgcatatcttcaacttcaaggatatctgcgcc
aagctgtcgcaggccgaagggctgatcaccgtgaccgacgaagactctctggtcaaggaa
gtcgccaccctgctcaccgacgaagactatcgccgctattacggccgccacgcagtggaa
gtgctgtatcagaatcagggagcgctgcagcgcctgctgcaactgctggaaccgcacctg
ccgccacggagccattaa
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