Streptococcus pyogenes MGAS8232 (serotype M18): spyM18_0079
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Entry
spyM18_0079 CDS
T00079
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
spm
Streptococcus pyogenes MGAS8232 (serotype M18)
Pathway
spm03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
spm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
spyM18_0079 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spm03021
]
spyM18_0079 (rpoA)
03400 DNA repair and recombination proteins [BR:
spm03400
]
spyM18_0079 (rpoA)
Enzymes [BR:
spm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
spyM18_0079 (rpoA)
Transcription machinery [BR:
spm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
spyM18_0079 (rpoA)
DNA repair and recombination proteins [BR:
spm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
spyM18_0079 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Mg_chelatase_C
SusF_SusE
Motif
Other DBs
NCBI-ProteinID:
AAL96902
UniProt:
P66711
LinkDB
All DBs
Position
77774..78712
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AA seq
312 aa
AA seq
DB search
MIEFEKPIITKIDENKDYGRFVIEPLERGYGTTLGNSLRRVLLSSLPGAAVTSIKIDGVL
HEFDTIPGVREDVMQIILNVKGLAVKSYVEDEKIIELEVEGPAEVTAGDILTDSDIELVN
PDHYLFTIAEGHSLRATMTVAKKRGYVPAEGNKKDDAPVGTLAVDSIYTPVKKVNYQVEP
ARVGSNDGFDKLTIEIMTNGTIIPEDALGLSARVLIEHLNLFTDLTEVAKATEVMKETEK
VNDEKVLDRTIEELDLSVRSYNCLKRAGINTVFDLTEKSEPEMMKVRNLGRKSLEEVKVK
LADLGLGLKNDK
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgattgagtttgaaaaaccaataataacaaaaattgatgaaaataaagattacggtaga
tttgtcatcgaaccacttgaacgtggctacggaacaactctaggtaattctcttcgtcgt
gtactcttgtcttcacttccaggtgcagcagtaacatcaattaaaattgatggagtacta
cacgaatttgatacaatcccaggtgtacgtgaagatgtcatgcaaattatccttaatgtt
aagggacttgctgtgaaatcatacgtcgaagacgaaaagattatcgaacttgaagtagaa
ggaccagcagaggtaacagctggtgatattcttactgacagtgatatcgaacttgttaac
ccggatcattatctttttacaatcgctgaaggacattctctacgtgcaacaatgactgtt
gctaaaaaacgtggttatgtgccagcagaaggcaacaaaaaagatgatgcacctgtgggt
acattggcagtagattcaatctatacgccagttaaaaaagttaattatcaagttgaacct
gcccgtgtaggtagcaatgatggctttgataaattaacgattgaaatcatgacaaacgga
acaattattcctgaagatgctttaggtctatctgctcgagttttgatcgaacacttaaac
ctgtttactgatttaacagaggttgcaaaagctaccgaagtaatgaaagaaactgaaaaa
gtgaacgatgaaaaggtacttgaccgcaccatcgaggagcttgatttatccgtacgctca
tataactgtttaaaacgtgcaggcattaacactgtcttcgacttaacagaaaaatctgag
cctgaaatgatgaaagtccgtaatcttggacgtaagagccttgaagaagttaaggttaaa
cttgctgacttaggtctcggactaaaaaacgataaataa
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