Streptococcus pyogenes MGAS8232 (serotype M18): spyM18_1941
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Entry
spyM18_1941 CDS
T00079
Name
(GenBank) conserved hypothetical protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
spm
Streptococcus pyogenes MGAS8232 (serotype M18)
Pathway
spm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
spyM18_1941
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spm03019
]
spyM18_1941
Messenger RNA biogenesis [BR:
spm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
spyM18_1941
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
SIS_2
Motif
Other DBs
NCBI-ProteinID:
AAL98438
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Position
1611829..1613511
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AA seq
560 aa
AA seq
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MTNISLKPNEVGVFAIGGLGEIGKNTYGIEYQDEIIIVDAGIKFPEDDLLGIDYVIPDYS
YIVDNLDRVKALVITHGHEDHIGGIPFLLKQANIPIYAGPLALALIRGKLEEHGLWREAT
VYEINHNTELTFKNMSVTFFKTTHSIPEPVGIVIHTPQGKIICTGDFKFDFTPVGDPADL
QRMAALGEEGVLCLLSDSTNAEIPTFTNSEKVVGQSILKIIEGIHGRIIFASFASNIYRL
QQAAEAAVKTGRKIAVFGRSMEKAIVNGIELGYIKVPKGTFIEPSELKNLHASEVLIMCT
GSQGESMAALARIANGTHRQVTLQPGDTVIFSSSPIPGNTTSVNKLINTIQEAGVDVIHG
KVNNIHTSGHGGQQEQKLMLSLIKPKYFMPVHGEYRMQKVHAGLAMDIGIPKENIFIMEN
GDVLALTSDSARIAGHFNAQDIYVDGNGIGDIGAAVLRDRRDLSEDGVVLAVATVDFNTQ
MILAGPDILSRGFIYMRESGDLIRESQRVLFNAIRIALKNKDASIQSVNGAIVNALRPFL
YEKTEREPIIIPMVLTPDKH
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgacaaatatcagtttaaaacctaatgaagttggggtgtttgccattggtggtctggga
gagattgggaagaatacttatggtattgagtatcaagacgagatcattatcgttgatgcc
ggtatcaaattcccagaagatgatcttttgggaattgattacgttattccagactattct
tacattgtcgataacttagaccgggtaaaagctcttgttattacacatggtcacgaagac
cacattggtggtattccatttcttctcaaacaggctaatatccctatctacgcaggacct
ttagcacttgctcttatccgtggtaaattggaagaacatggtctttggcgtgaagcaact
gtttacgaaatcaatcacaacaccgagttaacttttaaaaacatgagcgtcactttcttc
aagactactcattccattccagaaccggtcggtattgttatccacacccctcaaggtaag
attatctgtactggtgattttaaatttgacttcacgccagtaggagatcctgcagattta
caacgtatggcagcgcttggtgaagaaggtgttctttgcttattatcagactcaactaat
gctgaaatcccaacctttactaactctgaaaaagttgttggccaatccattttaaaaatt
atcgaaggtattcatggtcgtattatttttgcttccttcgcttcaaacatctaccgtttg
caacaggctgcagaagctgctgttaaaacgggacgtaaaattgccgtttttggtcgttct
atggaaaaggcaattgttaacggtattgaacttggctatattaaagttccaaaaggtacc
ttcattgagccaagcgaacttaaaaatcttcatgctagtgaagttttaattatgtgtaca
ggtagtcaaggtgagtctatggcagcacttgctcgtatcgctaatggcactcatcgtcaa
gtaactttacagcctggtgatactgtgattttctcatcaagtccaatccctggtaatacc
acaagtgtcaataaattaatcaataccatccaagaagctggtgttgatgttattcatgga
aaagtcaataatattcatacttctggtcatggaggacagcaagaacaaaagctcatgctt
agtttgattaaaccaaaatatttcatgccagtacatggtgagtatcgcatgcaaaaagtt
catgcaggactggcgatggatattggtattccaaaagaaaatatctttattatggaaaat
ggagacgttctagctttaaccagtgacagtgcgcgtattgctggtcactttaatgcccaa
gacatctacgtggatggtaatggcatcggggatattggagcagccgttttacgggaccgc
cgcgatttgtcagaagatggtgttgtcttagctgttgcaactgttgattttaacacacaa
atgattttagctggaccagatattctgagccgtggtttcatttatatgcgtgagtcaggt
gacttgatccgcgaaagccaacgtgtgctctttaacgctatccgtattgctttaaaaaat
aaggatgctagcatccaatcagttaacggtgctatcgtcaatgctcttcgtccattcttg
tatgaaaagactgagcgtgaaccaattataattccgatggtcttaacacctgataagcac
taa
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