Sphingomonas sp. M1-B02: OKW87_00345
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Entry
OKW87_00345 CDS
T11063
Name
(GenBank) DNA photolyase family protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
spmb Sphingomonas sp. M1-B02
Brite
KEGG Orthology (KO) [BR:
spmb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spmb03400
]
OKW87_00345
Enzymes [BR:
spmb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
OKW87_00345
DNA repair and recombination proteins [BR:
spmb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
OKW87_00345
Prokaryotic type
OKW87_00345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
UZK66328
LinkDB
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Position
67321..68670
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AA seq
449 aa
AA seq
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MTETSLVWLRQDLRLADQPALAAAAEAGVVIPVFVLDDETPGPRCRMGGAQRWWLHGSLE
RLAVDLEAVGSRLVLRRGRADVELVRLAEEVGATGIHALRHAEPWWRKIEEALGDRLTLH
DGNNLAPLRHIVTGGGQPYRIYSAFWRALQMQMPPPPPLPAPTRLAAPERWPHSDSLDSW
ALRPTRPDWATGFDMVPGEAEAARRLSDFVDRVDEYEVDRNLPGSEGTSRLSPHLHFGEI
SPATVWHGVEGQAQSEKFRKELAWRDFTQGVTLALSDYARTNGNRRYDALGWRQGPEAEA
DLRAWQQGRTGYPIVDAGMRQLWATGWMHNRVRMITASFLVKHLLIDWRRGWEWYWDTLL
DADYGNNSVNWQWVAGTGVDANMFSRIMAPLVQSEKFDAGDYIRAWVPELAGVRGAAIHD
PGPVNRYPAKIVEHREGRERALAAARMLR
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaaacctcgctcgtctggctgcgccaggatcttcgcctggcggaccagcccgct
cttgccgccgccgccgaggcgggggtcgtgatcccggtctttgttctcgacgacgagacg
ccgggaccgcgctgccggatgggcggcgcgcagcgctggtggctgcacgggtcgctcgag
cggctggctgtcgacctcgaggcggtaggatcgcggctggtgctgcggcggggcagggcc
gatgtcgagctggtaaggcttgccgaggaggtcggtgcgacgggcattcatgcgttgcgc
catgccgagccctggtggcgcaagatcgaggaagcgctgggcgaccggctgacgctccac
gacggcaacaatctcgcaccgctgcgccatatcgtcaccggcggtggccagccctatcgg
atctattcggctttctggcgcgcgctgcagatgcagatgccgcccccgccgccgctgcct
gcgccgacccgtcttgccgcacccgagcgctggccgcattcggattcgctcgacagctgg
gcgctgcggccgacgaggcccgattgggcgaccggcttcgacatggtgccgggtgaggcc
gaggcggcgcggcggctgtccgacttcgtcgatcgggtcgacgaatacgaagtggatcgc
aacctccccggctcggaaggtacgtcgcgcctgtcgccgcatctccacttcggcgagata
tcgccggcgacggtctggcacggcgtggaaggccaggcgcagtcggaaaagtttcgcaag
gagctcgcctggcgcgatttcacccaaggggtgacgctggcgctgtccgattatgcgcgg
accaacggcaaccgcagatatgatgcgctcggctggcgccagggcccggaagccgaggcc
gatctgcgcgcctggcagcaggggcggaccggctatccgatcgtcgatgccgggatgcgc
cagctgtgggcgacgggctggatgcacaatcgcgtgcggatgatcaccgcctccttcctg
gtgaagcatctcctcatcgactggcggcgcggctgggaatggtattgggacacgttgctc
gatgccgactacggcaacaacagcgtgaactggcagtgggtcgccggtaccggagtggat
gccaacatgttcagccggatcatggcgccgctcgtccagagcgagaagttcgatgcgggg
gactatatccgcgcctgggtgcccgagctggccggagtgcggggcgccgcgatccacgat
cccggcccggtgaaccgctatcccgccaagatcgtcgagcatcgcgagggacgcgagcgg
gctttggccgcggctcggatgctgcgttag
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